From 8064aac856fc04610ec95f7225f96f26c8c8bf47 Mon Sep 17 00:00:00 2001
From: YuviPanda <yuvipanda@gmail.com>
Date: Thu, 28 Dec 2023 11:07:17 -0800
Subject: [PATCH 1/3] Explicitly set VIRTUAL_ENV related env vars

Can be removed once https://github.com/rocker-org/rocker-versioned2/pull/740
is merged
---
 Dockerfile | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/Dockerfile b/Dockerfile
index 0f43c4e..fc6da30 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,5 +1,10 @@
 FROM rocker/binder:4.3.2
 
+# Needed until https://github.com/rocker-org/rocker-versioned2/pull/740 is
+# merged
+ENV VIRTUAL_ENV=/opt/venv
+ENV PATH=${VIRTUAL_ENV}/bin:${PATH}
+
 COPY requirements.txt /tmp/requirements.txt
 RUN pip install --no-cache -r /tmp/requirements.txt
 

From 0cefb96567fcd66ac2e0c32ee8846371a5e5710e Mon Sep 17 00:00:00 2001
From: YuviPanda <yuvipanda@gmail.com>
Date: Thu, 28 Dec 2023 12:53:04 -0800
Subject: [PATCH 2/3] Figure out what our uid is

---
 Dockerfile | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/Dockerfile b/Dockerfile
index fc6da30..d35246e 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -5,6 +5,8 @@ FROM rocker/binder:4.3.2
 ENV VIRTUAL_ENV=/opt/venv
 ENV PATH=${VIRTUAL_ENV}/bin:${PATH}
 
+RUN id && ls -la ${VIRTUAL_ENV}
+
 COPY requirements.txt /tmp/requirements.txt
 RUN pip install --no-cache -r /tmp/requirements.txt
 

From 75946611956069fd6cdebe6a9e60bcd313a14ac4 Mon Sep 17 00:00:00 2001
From: YuviPanda <yuvipanda@gmail.com>
Date: Thu, 28 Dec 2023 22:32:49 -0800
Subject: [PATCH 3/3] Install python packages as root

Non-root package installation still does not actually work
---
 Dockerfile | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/Dockerfile b/Dockerfile
index d35246e..242c200 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -5,11 +5,13 @@ FROM rocker/binder:4.3.2
 ENV VIRTUAL_ENV=/opt/venv
 ENV PATH=${VIRTUAL_ENV}/bin:${PATH}
 
-RUN id && ls -la ${VIRTUAL_ENV}
+USER root
 
 COPY requirements.txt /tmp/requirements.txt
 RUN pip install --no-cache -r /tmp/requirements.txt
 
+USER ${NB_USER}
+
 # Install learnr and other requested packages in https://2i2c.freshdesk.com/a/tickets/741
 # mosaic installed per https://2i2c.freshdesk.com/a/tickets/973
 RUN install2.r --skipinstalled \