Cargo.toml

[package]
name = "mappy-rs"
version = "0.0.7"
edition = "2021"
authors = ["Rory Munro <roryjmunro1@gmail.com>"]
license = "MIT OR Apache-2.0"
description = "Python Bindings to multithreaded rust minimap2"
repository = "https://github.com/adoni5/mappy-rs"
categories = ["science"]
keywords = ["bioinformatics", "fasta", "alignment", "fastq"]
exclude = [
	"**/*.fasta",
	"libsfasta/test_data/",
	"*.profdata",
]

# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
[lib]
name = "mappy_rs"

[dependencies]
libc = "0.2"
pyo3 = { version = "0.19" }
minimap2-sys = { version = "0.1.15+minimap2.2.26", features = ["simde"] }
crossbeam = "0.8.2"
fnv = "1.0.7"
ctrlc = {version = "3.4.0", features = ["termination"] }
itertools = "0.10.5"
minimap2 = {version = "0.1.15+minimap2.2.26" }

[features]
extension-module = ["pyo3/extension-module"]
default = ["extension-module"]

[profile.release]
opt-level = 3
lto = "fat"
codegen-units  = 1

[profile.dev]
debug = true

[profile.dev.package."*"]
opt-level = 3