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<!DOCTYPE html>
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Oceanography
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Phytoplankton
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Bioinformatics
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<h1>About the lab</h1>
<p>Our lab focuses on the application of computational approaches to oceanographic questions. We use a combination of culture- and field-based studies to better understand the biogeochemical functioning and physiological ecology of eukaryotic plankton in a changing ocean. Topics of interest include the maintenance of genetic diversity in planktonic populations and the role of biodiversity in ecosystem functioning.</p>
<p>We aim to make research done in this lab openly available and reproducible, and work to share these approaches with other researchers.</p>
<p>Interested in <a href="/join">joining the lab</a>?</p>
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<h2 class="mb-4">Lab Members</h2>
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<a href="/authors/cpalermo/"><img class="portrait" src="/author/cpalermo/avatar_hu830fc11f738f0d41ca22b5d63df4a483_197886_150x150_fill_q90_lanczos_center.jpg" alt="Avatar"></a>
<div class="portrait-title">
<h2><a href="/authors/cpalermo/">Christine Natalie Palermo</a></h2>
<h3>Postdoc</h3>
<p class="people-interests">Viral ecology, Bioinformatics, Harmful Algal Blooms, Biological Oceanography</p>
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<a href="/authors/halexand/"><img class="portrait" src="/author/halexand/avatar_hu200d925875015daa0522743bbebb071a_1938423_150x150_fill_q90_lanczos_center.jpg" alt="Avatar"></a>
<div class="portrait-title">
<h2><a href="/authors/halexand/">Harriet Alexander</a></h2>
<h3>Assistant Scientist II</h3>
<p class="people-interests">Plankton Ecology, Biological Oceanography, Bioinformatics, Open Science</p>
</div>
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<a href="/authors/jhickman/"><img class="portrait" src="/author/jhickman/avatar_hu37fcc5a2c19a53966c718166046c90dd_2132453_150x150_fill_q90_lanczos_center.jpg" alt="Avatar"></a>
<div class="portrait-title">
<h2><a href="/authors/jhickman/">Jo Hickman</a></h2>
<h3>Graduate Student</h3>
<p class="people-interests">Plankton Ecology, Marine Mycology, Biological Oceanography, Bioinformatics, Omics, Computational Biology, Science Policy, Outreach</p>
</div>
</div>
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<a href="/authors/mmanning/"><img class="portrait" src="/author/mmanning/avatar_hud5b05f1dc73f5a61b31d91b1688d7d34_71318_150x150_fill_lanczos_center_2.png" alt="Avatar"></a>
<div class="portrait-title">
<h2><a href="/authors/mmanning/">Miah Manning</a></h2>
<h3>Graduate Student</h3>
<p class="people-interests">Plankton Ecology, Biological Oceanography, Bioinformatics, Harmful Algal Blooms, Genomics, Outreach</p>
</div>
</div>
<div class="col-12 col-sm-auto people-person">
<a href="/authors/rhamilton/"><img class="portrait" src="/author/rhamilton/avatar_huc6f455635156842cfb5406130adf5669_7014633_150x150_fill_lanczos_center_2.png" alt="Avatar"></a>
<div class="portrait-title">
<h2><a href="/authors/rhamilton/">Rayna Hamilton</a></h2>
<h3>Research Assistant III</h3>
<p class="people-interests">Bioinformatics, Genomics, Computational Biology, Plankton Ecology, Biological Oceanography</p>
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</div>
<div class="col-12 col-sm-auto people-person">
<a href="/authors/sshapiro/"><img class="portrait" src="/author/sshapiro/avatar_hu6d34d9c1641e1e77aec028a074e05795_93705_150x150_fill_q90_lanczos_center.jpeg" alt="Avatar"></a>
<div class="portrait-title">
<h2><a href="/authors/sshapiro/">Sara Shapiro</a></h2>
<h3>Research Assistant</h3>
<p class="people-interests">Marine Biology, Biological Oceanography, Microscopy, Scientific Illustration, Genetic Analysis, Morphological Analysis, Teaching</p>
</div>
</div>
<div class="col-md-12">
<p><h2 id="alumni">Alumni</h2>
<h4 id="postdocs">Postdocs</h4>
<p><a href="authors/mmarsbris/" target="_blank">Margaret Mars Brisbin</a> (2020-2023) <em>Now: Assistant Professor at Univesrity of South Florida– <a href="https://micolab-usf.github.io/home/" target="_blank">MICO lab</a></em></p>
<h4 id="graduate-students">Graduate Students</h4>
<p><a href="authors/akrinos/" target="_blank">Arianna Krinos</a> (2019-2024) <em>Now: C-Comp Postdoctoral Fellow at Brown University – <a href="https://akrinos.github.io/" target="_blank">Arianna’s website</a></em></p>
<h4 id="undergraduates">Undergraduates</h4>
<p><a href="authors/amcg/" target="_blank">Abigail McGarrigle</a>, CC-Crew (2024)<br />
<a href="authors/aschofield/" target="_blank">Alese Schofield</a>, CC-Crew (2022)<br />
<a href="authors/cnobrega/" target="_blank">Celeste Nobrega</a>, Guest Student (2021)<br />
<a href="authors/krice/" target="_blank">Kevin Rice</a>, Guest Student (2021)<br />
<a href="authors/lblum/" target="_blank">Laura Blum</a>, SSF (2019)</p>
</p>
</div>
</div>
</div>
</section>
<section id="projects" class="home-section wg-portfolio " >
<div class="container">
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<div class="col-xs-12 col-md-4 section-heading">
<h1>Projects</h1>
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<div class="col-xs-12 col-md-8">
<p><!-- <div class="alert alert-note">
<div>
<p>Quickly discover relevant content by <a href="https://alexanderlabwhoi.github.io/publication/" target="_blank">filtering publications</a>.</p>
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</p>
<div class="isotope projects-container js-layout-masonry ">
<div class="project-card project-item isotope-item js-id-metagenomics js-id-metatranscriptomics js-id-global js-id-Bio-GO-SHIP">
<div class="card">
<a href="/project/biogoship/" class="card-image hover-overlay">
<img src="/project/biogoship/featured_hu25d333fcded103db2f52f7476cb1420a_194629_550x0_resize_q90_lanczos.jpg" alt="" class="img-responsive">
</a>
<div class="card-text">
<h4><a href="/project/biogoship/" >Bio-GO-SHIP: Linking marine biodiversity and biogeochemistry</a></h4>
<div class="card-desription">
</div>
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</div>
</div>
<div class="project-card project-item isotope-item js-id-Transcriptomics js-id-Genomics js-id-Metagenome-Assembled js-id-MAGs js-id-Computation">
<div class="card">
<a href="/project/eukulele/" class="card-image hover-overlay">
<img src="/project/eukulele/featured_hu46f5f0b50f678bf01a73f9c8855d0958_64651_550x0_resize_q90_lanczos_2.png" alt="" class="img-responsive">
</a>