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OpenRRP schedule modifications - OpenScPCA setup, Conda #178

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Jen-OMalley opened this issue May 15, 2024 · 2 comments
Open

OpenRRP schedule modifications - OpenScPCA setup, Conda #178

Jen-OMalley opened this issue May 15, 2024 · 2 comments

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@Jen-OMalley
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Jen-OMalley commented May 15, 2024

  • The OpenScPCA Setup module took longer than expected. We may want to modify the schedule to allow for more time if we do this again in the future. It took about 2 hours to complete.
  • We also might consider doing some of the Conda slides that are related to setup before OpenScPCA Setup.
@Jen-OMalley Jen-OMalley changed the title OpenScPCA setup module ran long OpenRRP schedule modifications - OpenScPCA setup, Conda May 15, 2024
@sjspielman
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sjspielman commented May 15, 2024

Additional scheduling observations -

  • Analysis modules part 1 took ~35 min
  • Analysis modules part 2 took ~45 min
    • We also showed using conda-lock before doing S3 syncing, but we did not show dealing with pre-commit fail. Edit: we circled back and did pre-commit after a short coffee break, and it took about 5-7 min

@sjspielman
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Code review slides took about 20 minutes, and the Ewings issue/PR tour also took about 15-20 minutes

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