From 8963d686e348c0323f21240fe6ffa83c1cbc01eb Mon Sep 17 00:00:00 2001 From: Ryan Lane Date: Wed, 7 Aug 2024 14:59:55 -0700 Subject: [PATCH] Update README.md couple more periods that should be colons Signed-off-by: Ryan Lane --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 8df7d1c..764f225 100644 --- a/README.md +++ b/README.md @@ -124,7 +124,7 @@ Note that in the above examples, `--output-directory` is an optional argument. I ### Making movies of tracked cells To provide some sort of visual confirmation that the segmentation and cell tracking was done successfully, there are also scripts for adding animations of cell trajectories to the tracked cells using the napari plugin [napari-animation](https://github.com/napari/napari-animation). Here the choice for which script to run depends on the type of vessel used in the experiment. -To create animations of tracked cells in 384- or 1536-well plates at 20 fps. +To create animations of tracked cells in 384- or 1536-well plates at 20 fps: ```bash python src/chlamytracker/scripts/make_movies_of_wells.py \ /path/to/directory/of/nd2/files/ \ @@ -132,7 +132,7 @@ python src/chlamytracker/scripts/make_movies_of_wells.py \ --output-directory /path/to/writeable/storage/location/ ``` -To create animations of tracked cells in agar microchamber pools at 30 fps. +To create animations of tracked cells in agar microchamber pools at 30 fps: ```bash python src/chlamytracker/scripts/make_movies_of_pools.py \ /path/to/directory/of/nd2/files/ \