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CHANGELOG.md

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Changelog

v1.1 (06/05/2020)

Release presented at EGU2020: https://doi.org/10.5194/egusphere-egu2020-18751

conda install -c gimli -c conda-forge pygimli=1.1 # Win, Linux and Mac!

Main changes:

API renaming & namespace clean-up
  • pg.mplviewer - > pg.viewer.mpl
  • pg.RVector -> pg.Vector
  • pg.RMatrix -> pg.Matrix
  • New module pg.math (cos, cot, sin, det, exp10, median, randn, rms, etc.)
  • New module pg.matrix (Vector, BlockMatrix, etc.)
Default changes in viewer
  • logScale=False
  • colorBar=True

v1.0.12 (28/10/2019)

conda install -c gimli -c conda-forge pygimli=1.0.12 # Win & Linux!

bug

  • [bug] Problem using fatray #188
  • [bug] pg.solver.solveFiniteElements(mesh, a=1.0, b=0...) does not work if b is set as a field #181

v1.0.11 (03/04/2019)

conda install -c gimli -c conda-forge pygimli=1.0.11 # currently Linux only

bug

  • [bug] Examples Raypaths, Layered Example not working #167

closed

  • [closed] Trying the Field data inversion (“Koenigsee”) example #164
  • [closed] Question -ModuleNotFoundError: No module named 'pygimli' #160

v1.0.10 (04/01/2019)

Changes

Closed issues

bug

  • [bug] drawField does not work for very small values #136
  • [bug] potential wrong reference to const & RMatrix() const in python bindings #61

closed

  • [closed] Parameter check in createRectangle #158
  • [closed] Mesh creation: marker parameter not always honored #152

feature request

  • [feature request] Support vtk STRUCTURED_GRID Dataset #87

Misc

fixes

  • polyCreate* that does not use leftDirection.
  • wrong Neumann BC scaling,

adds

  • dataContainerERT.addFourPointData accept now also values
  • pygimli/core/datacontainer.py for easy extentions
  • createCylinder(OOC: polytools), createMesh() accecpt 3D PLC and now tries a systemcall for tetgen
  • dataIndex(), dataContainer.sortSensorIndex() returns now sorting indieces.
  • isGeometry flag for core.Mesh. If set meshtool automatic check for duplicated nodes.
  • BlockMatrix to sparseMap conversion
  • argument for solver.linSolver to change solving backend

doc

  • slight changes to interpolation api docs

v1.0.9 (30/10/2018)

conda install -c gimli pygimli=1.0.9 # currently Linux only

New functionality

Other changes

v1.0.8 (27/09/2018)

New functionality

Closed

  • [closed] pygimli.frameworks.harmfit does not work with numpy integers for nc #143

Changes

  • mt.mergePLC recognize node on edge touching (not vice versa)
  • show now checks for used 2d coordinates (x,y) or (x,z)
  • mesh.createNodeWithCheck can now check for edge touching and split the edge on hit
  • renamed: mesh.extract to mesh.createSubMesh

v1.0.7 (04/08/2018)

bug

  • [bug] Zero or one-based sensor indexing for traveltime data container? #141

closed

  • [closed] Retrieve pyGIMLi version is 'untagged' #137
  • [closed] marker view with pg.show() #135

fixes:

  • pure singe region now build correct interregion constraints without region file
  • passive body cem problem in bert fop
  • *Vector < operator
  • mesh bounding box problem for post createNode

add:

  • repr for pg.Node.
  • pg.load for *.collect files
  • circular flag for patchValMap
  • DataContainer.remove(BVector)
  • showNodes flag to drawPLC
  • boundingbox syntax sugar

remove:

  • DataContainer.filter

v1.0.6 (03/04/2018)

new functionality

  • pg.show(geom, markers=True) to inspect region and boundary markers of PLCs (also works for meshes)
  • mt.interpolateAlongCurve, add simple extrapolation for to little curve bounds.
  • pg.warn(*args), pg.info(*args), pg.debug(*args) etc. easier logging interface #14
  • Pos=Vector3 alias
  • mt.createGrid proxy function
  • static ndim property to pg.Vector, pg.Matrix etc.
  • convenience calls: pg.x, pg.y, and pg.z to return appropriate arrays for (data, mesh, R3Vector, ndarray, ..)
  • core: improve mesh entities selection via (BVector), e.g., mesh.cells(mesh.cellMarkers() == 1) is the same as mesh.cells(pg.find(mesh.cellMarkers() == 1))
  • mplviewer new flag: showBoundary
  • pg.getConfigPath() returns path to user config
  • add more flexible way to define callables for boundary conditions

other changes

  • pg.test() compatible with numpy 1.14 (and 1.13)
  • documentation compatible with Sphinx > 1.6 (new -i flag in sphinx-autogen)
  • increased visibility of hyperlinks in documentation
  • removed io/ path #124

backward compatibility

  • [backward compatibility] Backward compatibility of pg.interpolate #131

bug

  • [bug] Plotting issue for multiple subplots in Jupyter Notebook #125
  • fix implementation of Neumann boundary conditions.

enhancement

  • [enhancement] pg.meshtools.cellDataToNodeData does not take scalar fields #120
  • CellBrowser: Highlight style, click now toggle, data and mesh can be changed

closed issues

  • [closed] Drawing a colorbar with pg.mplviewer.drawModel #130
  • [closed] 'MemoryError' for pb.invert #129
  • [closed] FDEM dataset #122
  • [closed] petro.resistivityArchie interpolation returns 'corrupt mesh' error #107
  • [closed] API doc not building with sphinx 1.6.3 #74

v1.0.5 (22/12/2017)

Install with Ana- or Miniconda:

conda install pygimli=v1.0.5

Fixes:

  • automatic RValue conversion for scalar numpy data types to pg.core long
  • Crank-Nicolson solver is now working again with default theta setting

building and distribution

  • [building and distribution] Make setup.py and conda's meta.yaml aware of pg.version #110

v1.0.4 - Start of consequent versioning (22/12/2017)

Install with Ana- or Miniconda:

conda install pygimli=v1.0.4