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OpenTargetsDiseaseOntologyParser no longer skips top level TA's #46

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merged 1 commit into from
Jun 25, 2024
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OpenTargetsDiseaseOntologyParser no longer skips top level TA's #46

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4 changes: 0 additions & 4 deletions kazu/ontology_preprocessing/parsers.py
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Original file line number Diff line number Diff line change
Expand Up @@ -222,10 +222,6 @@ def json_dict_to_parser_records(
for json_dict in jsons_gen:
default_label: str = json_dict["name"]

# skip top level therapeutic areas
if json_dict.get("ontology", {}).get("isTherapeuticArea"):
continue

if set(json_dict.get("therapeuticAreas", ())).isdisjoint(
self.allowed_therapeutic_areas
):
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