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cross-platform molecular editor and visualization tool. In particular, it was built on top of the [Open Babel](https://openbabel.org) open source cheminformatics toolkit to handle import and export, force field optimization, partial charge assignment and other tasks. + +The development and features of Avogadro were covered in: +[Hanwell, M.D., Curtis, D.E., Lonie, D.C. et al. Avogadro: an advanced semantic chemical editor, visualization, and analysis platform. J Cheminform 4, 17 (2012).](https://doi.org/10.1186/1758-2946-4-17) + +```{toctree} +--- +maxdepth: 1 +--- +v120 +v111 +v110 +v103 +v102 +v101 +v100 +v099 +v098 +v097 +v096 +v095 +v094 +v093 +v092 +v091 +v090 +v081 +v080 +v061 +v060 +v020 +v010 +``` diff --git a/_sources/install/versions/avogadro2.md.txt b/_sources/install/versions/avogadro2.md.txt new file mode 100644 index 00000000..5d70f691 --- /dev/null +++ b/_sources/install/versions/avogadro2.md.txt @@ -0,0 +1,25 @@ +(v2)= + +# Avogadro v2 + +Avogadro 2 is currently in beta. It was re-written from scratch to address a number of issues with the [Avogadro v1](v1) codebase. + +Major concerns in Avogadro 1.0 focused on stability (i.e., crashes) and speed, particularly with molecules or systems over a few hundred atoms. **Avogadro v2 was designed for fast modern rendering and improved stability. It is a platform to make it easy to build the next generation of molecular and materials visualization and editing tools.** + +```{toctree} +--- +maxdepth: 1 +--- +v199 +v1981 +v198 +v197 +v196 +v1951 +v195 +v194 +v193 +v192 +v191 +v190 +``` diff --git a/_sources/install/versions/index.md.txt b/_sources/install/versions/index.md.txt index ed9cfa87..180eec08 100644 --- a/_sources/install/versions/index.md.txt +++ b/_sources/install/versions/index.md.txt @@ -7,7 +7,7 @@ previous versions of Avogadro (1.2 and older) ```{toctree} --- -maxdepth: 1 +maxdepth: 2 --- v199 v1981 diff --git a/_sources/install/versions/v098.md.txt b/_sources/install/versions/v098.md.txt index 1cb691c3..ef3d9e91 100644 --- a/_sources/install/versions/v098.md.txt +++ b/_sources/install/versions/v098.md.txt @@ -1,6 +1,6 @@ (v098)= -# Avogadro v0.9.8 +# Avogadro 0.9.8 Avogadro 0.9.8 was released on 9 September 2009. This is the ninth of our final beta series before Avogadro 1.0.0 is released. Please help us by providing feedback. New beta releases are expected roughly once per month until the 1.0.0 release. You can [download this release here](http://sourceforge.net/project/showfiles.php?group_id=165310&package_id=187449). diff --git a/_sources/install/versions/v099.md.txt b/_sources/install/versions/v099.md.txt index 2a28c0cf..0c7e9d2e 100644 --- a/_sources/install/versions/v099.md.txt +++ b/_sources/install/versions/v099.md.txt @@ -1,6 +1,6 @@ (v099)= -# Avogadro v0.9.9 +# Avogadro 0.9.9 Avogadro 0.9.9 was released on 17 October 2009. This is the tenth of our final beta series before Avogadro 1.0.0 is released. Please help us by providing feedback. New beta releases are expected roughly once per month until the 1.0.0 release. You can [download this release here](http://sourceforge.net/project/showfiles.php?group_id=165310&package_id=187449). diff --git a/_sources/install/versions/v101.md.txt b/_sources/install/versions/v101.md.txt index 6caa1ea3..a9a32ec8 100644 --- a/_sources/install/versions/v101.md.txt +++ b/_sources/install/versions/v101.md.txt @@ -1,6 +1,6 @@ (v101)= -# Avogadro v1.0.1 +# Avogadro 1.0.1 Avogadro 1.0.1 was released on 28 April 2010. diff --git a/_sources/install/versions/v102.md.txt b/_sources/install/versions/v102.md.txt index c3e94fc7..12033d15 100644 --- a/_sources/install/versions/v102.md.txt +++ b/_sources/install/versions/v102.md.txt @@ -1,6 +1,6 @@ (v102)= -# Avogadro v1.0.2 +# Avogadro 1.0.2 Avogadro 1.0.2 was released on 22 April 2011. diff --git a/_sources/install/versions/v103.md.txt b/_sources/install/versions/v103.md.txt index ca9e8e54..94d04184 100644 --- a/_sources/install/versions/v103.md.txt +++ b/_sources/install/versions/v103.md.txt @@ -1,6 +1,6 @@ (v103)= -# Avogadro v1.0.3 +# Avogadro 1.0.3 Avogadro 1.0.3 was released on 25 April 2011. It contains a single fix for building translations. diff --git a/_sources/install/versions/v110.md.txt b/_sources/install/versions/v110.md.txt index 5327fb6c..d97268f8 100644 --- a/_sources/install/versions/v110.md.txt +++ b/_sources/install/versions/v110.md.txt @@ -1,6 +1,6 @@ (v110)= -# Avogadro v1.1.0 +# Avogadro 1.1.0 Avogadro 1.1.0 was released on September 12, 2012. diff --git a/_sources/install/versions/v111.md.txt b/_sources/install/versions/v111.md.txt index f6681c57..bf7408a1 100644 --- a/_sources/install/versions/v111.md.txt +++ b/_sources/install/versions/v111.md.txt @@ -1,6 +1,6 @@ (v111)= -# Avogadro v1.1.1 +# Avogadro 1.1.1 Avogadro 1.1.1 was released on December 11, 2013. diff --git a/_sources/install/versions/v190.md.txt b/_sources/install/versions/v190.md.txt new file mode 100644 index 00000000..3cce6d8f --- /dev/null +++ b/_sources/install/versions/v190.md.txt @@ -0,0 +1,10 @@ +(v190)= + +# Avogadro 1.90.0 + +3 December 2016 + +We are pleased to announce the latest release of Avogadro, including piles of +bug fixes and feature enhancements. + +In particular v1.90 includes substantial improvements for handling crystallographic unit cells, including space group symmetry, and handling VASP calculations, as a result of a Google Summer of Code project of Patrick Avery. diff --git a/_sources/install/versions/v191.md.txt b/_sources/install/versions/v191.md.txt new file mode 100644 index 00000000..0e6c64a0 --- /dev/null +++ b/_sources/install/versions/v191.md.txt @@ -0,0 +1,10 @@ +(v191)= + +# Avogadro 1.91.0 + +22 August 2018 + +We are pleased to announce the latest release of Avogadro, including piles of +bug fixes and feature enhancements. + +This release has a lot of new work completed over the last year, including the results of our first Google Summer of Code where two students worked on projects under the program. diff --git a/_sources/install/versions/v192.md.txt b/_sources/install/versions/v192.md.txt new file mode 100644 index 00000000..6d024af9 --- /dev/null +++ b/_sources/install/versions/v192.md.txt @@ -0,0 +1,13 @@ +(v192)= + +# Avogadro 1.92.0 + +31 October 2018 + +We are pleased to announce the latest release of Avogadro, including piles of +bug fixes and feature enhancements. + +- Added support for the MMTF format form use with the Protein Data Bank +- Added support for rendering atom forces +- Added setting bond orders for common amino acid residues +- New implementation of Python library using the Avogadro core for file IO and calculating orbitals and electron density diff --git a/_sources/install/versions/v193.md.txt b/_sources/install/versions/v193.md.txt new file mode 100644 index 00000000..64c02305 --- /dev/null +++ b/_sources/install/versions/v193.md.txt @@ -0,0 +1,13 @@ +(v193)= + +# Avogadro 1.93.0 + +5 February 2020 + +We are pleased to announce the latest release of Avogadro, including piles of +bug fixes and feature enhancements. + +- Support for Open Babel 3.0 +- New rendering using VTK including volumetric orbitals and electron density +- Use VTK charts for rendering band structures and other plots +- Use MongoChem to access databases from servers diff --git a/_sources/install/versions/v194.md.txt b/_sources/install/versions/v194.md.txt index 67f54b71..be98d155 100644 --- a/_sources/install/versions/v194.md.txt +++ b/_sources/install/versions/v194.md.txt @@ -1,6 +1,6 @@ (v194)= -# Avogadro v1.94.0 +# Avogadro 1.94.0 2 June 2021 diff --git a/_sources/install/versions/v195.md.txt b/_sources/install/versions/v195.md.txt index 2e417cab..25177266 100644 --- a/_sources/install/versions/v195.md.txt +++ b/_sources/install/versions/v195.md.txt @@ -1,6 +1,6 @@ (v195)= -# Avogadro v1.95.0 +# Avogadro 1.95.0 16 August 2021 diff --git a/_sources/install/versions/v1951.md.txt b/_sources/install/versions/v1951.md.txt index 2ddf1dae..a90a9d4c 100644 --- a/_sources/install/versions/v1951.md.txt +++ b/_sources/install/versions/v1951.md.txt @@ -1,6 +1,6 @@ (v1951)= -# Avogadro v1.95.1 +# Avogadro 1.95.1 26 August 2021 diff --git a/_sources/install/versions/v196.md.txt b/_sources/install/versions/v196.md.txt index bd4a4d5b..38f71294 100644 --- a/_sources/install/versions/v196.md.txt +++ b/_sources/install/versions/v196.md.txt @@ -1,6 +1,6 @@ (v196)= -# Avogadro v1.96.0 +# Avogadro 1.96.0 2 June 2022 diff --git a/_sources/install/versions/v197.md.txt b/_sources/install/versions/v197.md.txt index edd003b3..3c15777c 100644 --- a/_sources/install/versions/v197.md.txt +++ b/_sources/install/versions/v197.md.txt @@ -1,6 +1,6 @@ (v197)= -# Avogadro v1.97.0 +# Avogadro 1.97.0 21 July 2022 diff --git a/_sources/install/versions/v198.md.txt b/_sources/install/versions/v198.md.txt index 5e0b0011..5503db40 100644 --- a/_sources/install/versions/v198.md.txt +++ b/_sources/install/versions/v198.md.txt @@ -1,6 +1,6 @@ (v198)= -# Avogadro v1.98.0 +# Avogadro 1.98.0 26 October 2023 diff --git a/_sources/install/versions/v1981.md.txt b/_sources/install/versions/v1981.md.txt index 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Avogadro 1#

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The development and features of Avogadro were covered in: +Hanwell, M.D., Curtis, D.E., Lonie, D.C. et al. Avogadro: an advanced semantic chemical editor, visualization, and analysis platform. J Cheminform 4, 17 (2012).

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Avogadro v2#

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Avogadro 2 is currently in beta. It was re-written from scratch to address a number of issues with the Avogadro v1 codebase.

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Major concerns in Avogadro 1.0 focused on stability (i.e., crashes) and speed, particularly with molecules or systems over a few hundred atoms. Avogadro v2 was designed for fast modern rendering and improved stability. It is a platform to make it easy to build the next generation of molecular and materials visualization and editing tools.

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  • Install
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