Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add new assembler support - NAME #36

Open
deyuanyang opened this issue May 5, 2023 · 0 comments
Open

Add new assembler support - NAME #36

deyuanyang opened this issue May 5, 2023 · 0 comments
Assignees
Labels
enhancement New feature or request

Comments

@deyuanyang
Copy link

Hi,

It's a perfect soft!

How to use this soft? when I run the following command, but it does not work, would you mind giving me some suggestions?

(lams) deyuan@deyuan:/media/deyuan/NCBI/Norgal_animal_data$ LMAS --fastq SRR2089775 --megahit --megahitKmerSize --reference /media/deyuan/NCBI/Norgal_animal_data/SRR2089775/2.NOVOPlasty/Circularized_assembly_1_SRR2089775.fasta
N E X T F L O W ~ version 23.04.1
Launching /home/deyuan/miniconda3/envs/lams/share/lmas-2.0.x/main.nf [soggy_lichterman] DSL2 - revision: 929afaa022
Trace file already exists: /media/deyuan/NCBI/Norgal_animal_data/pipeline_stats.txt -- enable the 'trace.overwrite' option in your config file to overwrite existing files
(lams) deyuan@deyuan:/media/deyuan/NCBI/Norgal_animal_data$

deyuan

@deyuanyang deyuanyang added the enhancement New feature or request label May 5, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

2 participants