remove commas while parsing floats

BCCDC-PHL · Sep 9, 2024 · 99c850b · 99c850b
1 parent 2ab0a84
commit 99c850b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bin/qualimap_bamqc_genome_results_to_json.py b/bin/qualimap_bamqc_genome_results_to_json.py
@@ -260,7 +260,7 @@ def parse_coverage_section(report_path):
             key = key.strip().replace(' ', '_').replace('coverageData', 'coverage').lower()
             value = value.strip()
             if key in float_x_keys:
-                value = value.replace('X', '')
+                value = value.replace('X', '').replace(',', '')
                 value = float(value)
         coverage_section[key] = value