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Split read_graph into 3 separate fns: generic read, stringdb read and… .github/workflows/benchmarks.yml #105: Commit 15ec33e pushed by trsvchn
February 28, 2024 13:57 3m 55s main
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February 28, 2024 13:57 3m 55s
Fixes #50. Only ask for comma-separated variables names in CLI; for i… .github/workflows/benchmarks.yml #104: Commit 7be3e24 pushed by borauyar
February 28, 2024 10:23 3m 52s main
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February 28, 2024 10:23 3m 52s
don't expose DirectPredCNN to the user yet; in development mode .github/workflows/benchmarks.yml #103: Commit 654bdc5 pushed by borauyar
February 28, 2024 09:37 4m 5s main
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February 28, 2024 09:37 4m 5s
Merge pull request #55 from BIMSBbioinfo/survival .github/workflows/benchmarks.yml #102: Commit 0a01f18 pushed by borauyar
February 27, 2024 21:52 4m 11s main
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February 27, 2024 21:52 4m 11s
allow user to provide a set of features which restrict the analysis t… .github/workflows/benchmarks.yml #101: Commit 25dbbd4 pushed by borauyar
February 26, 2024 10:31 3m 55s main
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February 26, 2024 10:31 3m 55s
distinguish feature names and indices in variable names .github/workflows/benchmarks.yml #100: Commit b2c6543 pushed by borauyar
February 26, 2024 08:35 3m 59s main
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February 26, 2024 08:35 3m 59s
fix error with handling feature indices and feature names .github/workflows/benchmarks.yml #99: Commit 4edefbc pushed by borauyar
February 23, 2024 16:20 4m 10s main
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February 23, 2024 16:20 4m 10s
print feature logs for each layer into file .github/workflows/benchmarks.yml #98: Commit 9cf78aa pushed by borauyar
February 23, 2024 11:56 4m 12s main
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February 23, 2024 11:56 4m 12s
Fixes #48 and #45; check for potential errors in the input data .github/workflows/benchmarks.yml #97: Commit dca1ae1 pushed by borauyar
February 22, 2024 10:25 4m 29s main
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February 22, 2024 10:25 4m 29s
use correlation threshold instead of boolean .github/workflows/benchmarks.yml #96: Commit ebee6cd pushed by borauyar
February 22, 2024 09:19 3m 59s main
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February 22, 2024 09:19 3m 59s
move modality-based graph filtering to another function; improve log … .github/workflows/benchmarks.yml #95: Commit 36e736d pushed by borauyar
February 21, 2024 13:30 3m 59s main
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February 21, 2024 13:30 3m 59s
add function to get predicted labels and print predicted labels to fo… .github/workflows/benchmarks.yml #94: Commit ef898ad pushed by borauyar
February 16, 2024 13:36 4m 3s main
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February 16, 2024 13:36 4m 3s
set global seed to seed everything .github/workflows/benchmarks.yml #93: Commit eda4eeb pushed by borauyar
February 15, 2024 13:18 3m 54s main
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February 15, 2024 13:18 3m 54s
Implement new CLI (#36) .github/workflows/benchmarks.yml #92: Commit a07ea6f pushed by trsvchn
February 6, 2024 09:44 4m 1s main
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February 6, 2024 09:44 4m 1s
Replace "switch" statement with typed tuple for model classes def (#35) .github/workflows/benchmarks.yml #91: Commit 06a326b pushed by trsvchn
February 5, 2024 09:42 8m 30s main
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February 5, 2024 09:42 8m 30s
decrease required features and early stop patience to save time in GHA .github/workflows/benchmarks.yml #90: Commit fc7b146 pushed by borauyar
January 29, 2024 11:52 5m 10s main
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January 29, 2024 11:52 5m 10s
turn on all benchmarks; turn off baseline performance evaluation for … .github/workflows/benchmarks.yml #89: Commit e7d4363 pushed by borauyar
January 29, 2024 11:39 10m 56s main
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January 29, 2024 11:39 10m 56s
Fix embeddings extraction for GCNN (#33) .github/workflows/benchmarks.yml #88: Commit 7be95b1 pushed by trsvchn
January 26, 2024 15:01 32m 5s main
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January 26, 2024 15:01 32m 5s
Fix predict method of GCNN (#32) .github/workflows/benchmarks.yml #87: Commit f0a86ec pushed by trsvchn
January 26, 2024 13:46 5m 38s main
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January 26, 2024 13:46 5m 38s
Use the correct list of dependent variables (#31) .github/workflows/benchmarks.yml #86: Commit 79afdc6 pushed by trsvchn
January 26, 2024 13:15 4m 12s main
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January 26, 2024 13:15 4m 12s
Fix fusion type (#30) .github/workflows/benchmarks.yml #85: Commit ac0364a pushed by trsvchn
January 26, 2024 12:55 3m 38s main
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January 26, 2024 12:55 3m 38s
Fix data_import node type arg (#28) .github/workflows/benchmarks.yml #84: Commit c8d0fca pushed by trsvchn
January 26, 2024 12:12 3m 39s main
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January 26, 2024 12:12 3m 39s
Update choices list for model_class arg (#27) .github/workflows/benchmarks.yml #83: Commit 3cf2a29 pushed by trsvchn
January 26, 2024 11:18 35m 48s main
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January 26, 2024 11:18 35m 48s
Fix unzip stringdb files step for GHA benchmark (#26) .github/workflows/benchmarks.yml #82: Commit 5174930 pushed by trsvchn
January 26, 2024 10:19 36m 20s main
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January 26, 2024 10:19 36m 20s
Fix GHA benchmark workflow for GCNN (#25) .github/workflows/benchmarks.yml #81: Commit f1839d8 pushed by trsvchn
January 26, 2024 09:08 2m 0s main
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January 26, 2024 09:08 2m 0s