Summary Introduction PiGx RNA-seq Introduction Installation Quick start Preparing the input Running the pipeline Output description Troubleshooting Questions PiGx ChIP-seq Introduction Installation Quick Start Preparing Input Running the Pipeline Output Description Troubleshooting Questions PiGx BS-seq Introduction Installation Quick start Preparing the input Running the pipeline Output description Troubleshooting Questions PiGx scRNA-seq Introduction Installation Quick start Preparing the input Running the pipeline Output description Troubleshooting Questions PiGx SARS-CoV-2 Introduction Installation Quick start Preparing the input Running the pipeline Output description Troubleshooting