DESCRIPTION

Package: spatialNetSmooth
Type: Package
Title: Smoothing GSEA-scores using netSmooth
Version: 0.1.0
Author: Rahel Berghold
Maintainer: Rahel Berghold <rabe-berlin@posteo.de>
Description: Calculates GSEA-scores of an object (Seurat or VoltRon) and smoothes the scores using network propagation. The scores can be thresholded and plottet against a known ground truth.
License: What license is it under?
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
Suggests: 
    testthat (>= 3.0.0),
    VoltRon
Config/testthat/edition: 3
biocViews:
Depends:
    clusterExperiment
Imports: 
    Seurat,
    ggplot2,
    BiocParallel,
    GSEABase,
    GSVA,
    caret,
    magrittr,
    netSmooth,
    pROC,
    parallelDist
Remotes: epurdom/clusterExperiment, BIMSBbioinfo/VoltRon