environment.yaml

channels:
 - conda-forge
 - bioconda
 - defaults
dependencies:
 - r-base=3.5.1
 - rstudio=1.1.456
 - r-seurat=3.0.0 
 - bioconductor-biomart=2.38
 - r-biocmanager=1.30
 - r-pheatmap=1.0 
 - r-fields=9.6.1
 - r-optparse=1.6
 - r-umap=0.2
 - r-modes=0.7.0
 - umap-learn=0.3.8
 - wget=1.19.4
 - fftw=3.3.8
 - bioconductor-singlecellexperiment=1.4.0
 - bioconductor-scran=1.10.1
 - r-hdf5r=1.2.0
 - r-rmarkdown
 - r-knitr=1.20
 - r-mvoutlier=2.0.9
 - bioconductor-destiny=2.12.0
 - r-umap=0.2.0.0