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Scheduled checks #35786

Scheduled checks

Scheduled checks #35786

Workflow file for this run

name: Scheduled checks
on:
schedule:
- cron: '*/5 * * * *'
workflow_dispatch:
defaults:
run:
shell: bash
concurrency:
group: "webchecks"
cancel-in-progress: false
jobs:
build:
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v4
with:
token: ${{ secrets.PAT }}
persist-credentials: true
- name: Check site accessibility and push results
id: check
uses: nick-fields/retry@v2
with:
timeout_minutes: 10
max_attempts: 20
shell: bash
command: |
set -x
git config --global --add safe.directory "$GITHUB_WORKSPACE"
git config user.name github-actions
git config user.email [email protected]
git pull origin main || git reset --hard origin/main
bash .github/scripts/web_check_and_report.sh 'webcheck' 'http://bioconductor.org' '(Auto-detected) Bioconductor Main Site Down' 'disrupted' 'Main site'
bash .github/scripts/web_check_and_report.sh 'webcheck' 'http://workshop.bioconductor.org' '(Auto-detected) Bioconductor Workshop Service Down' 'disrupted' 'Workshop Service'
bash .github/scripts/web_check_and_report.sh 'webcheck' 'http://slack.bioconductor.org' '(Auto-detected) Slack Invite App Down' 'disrupted' 'Slack app'
bash .github/scripts/web_check_and_report.sh 'webcheck' 'https://mghp.osn.xsede.org/bir190004-bucket01/archive.bioconductor.org/packages/3.17/index.html' '(Auto-detected) Bioconductor Archive Down' 'disrupted' 'Archive'
bash .github/scripts/web_check_and_report.sh 'webcheck' 'https://code.bioconductor.org' '(Auto-detected) Bioconductor Code Browser Down' 'disrupted' 'Bioconductor Code Browser'
bash .github/scripts/web_check_and_report.sh 'statscheck' 'https://bioconductor.org/packages/stats/bioc/' '(Auto-detected) Bioconductor Package Stats Failed Check' 'disrupted' 'Package Stats'
git commit -m "Update website checks $(date '+%Y-%m-%d-%H-%M-%S')"
git push
if grep 'yes' /tmp/webchecknotify > /dev/null; then
echo notify='yes' >> $GITHUB_OUTPUT
rm /tmp/webchecknotify
fi
- name: Set msg value
if: steps.check.outputs.notify=='yes'
id: msg
run: |
{
echo 'NOTIFYMSG<<EOF'
cat /tmp/webchecknotify-msg
echo EOF
} >> "$GITHUB_ENV"
rm /tmp/webchecknotify-msg
- name: Notify slack channel
uses: slackapi/[email protected]
with:
channel-id: '${{secrets.SLACK_CHANNEL_ID}}'
slack-message: |
At least one webcheck has changed.
${{env.NOTIFYMSG}}
env:
SLACK_BOT_TOKEN: ${{ secrets.SLACK_BOT_TOKEN }}
SLACK_CHANNEL_ID: ${{ secrets.SLACK_CHANNEL_ID }}
NOTIFYMSG: ${{env.NOTIFYMSG}}
if: env.SLACK_BOT_TOKEN != null && env.SLACK_CHANNEL_ID != null && steps.check.outputs.notify=='yes'
continue-on-error: true