Skip to content

Issues: BiomedicalMachineLearning/stLearn

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort

Issues list

visium HD application
#301 opened Jul 1, 2024 by revolvefire updated Dec 18, 2024
Read VisiumHD data through SpatialData / Support for Python 3.9
#316 opened Dec 18, 2024 by marcouderzo updated Dec 18, 2024
Running time of PTST analysis for Xenium data
#306 opened Jul 18, 2024 by Ferris01 updated Nov 24, 2024
Import H&E Image for Xenium
#314 opened Oct 24, 2024 by ChenlingTangMDA updated Oct 24, 2024
ValueError in stlearn.Read10X step
#313 opened Oct 8, 2024 by TLC199676 updated Oct 8, 2024
Cell to cell interaction: required data
#312 opened Sep 24, 2024 by JestlinNg updated Sep 24, 2024
Import issue
#311 opened Sep 16, 2024 by elmir-ma updated Sep 16, 2024
Clarification on Directionality in stLearn CCI Plots
#299 opened Jun 18, 2024 by gity123987 updated Sep 11, 2024
CCI Maps might have reversed axis labels!
#309 opened Jul 30, 2024 by je71xusa updated Sep 11, 2024
Error when running st.pl.cluster_plot
#307 opened Jul 23, 2024 by kevin198930 updated Jul 23, 2024
Gridding visualization with h&e image out of frame
#304 opened Jul 3, 2024 by Rabitta99 updated Jul 3, 2024
Image path when creating st object from other packages
#303 opened Jul 3, 2024 by je71xusa updated Jul 3, 2024
label_transfer_bc.csv
#297 opened Jun 11, 2024 by oabuhuss updated Jun 11, 2024
using stlearn for the first time.
#296 opened Jun 6, 2024 by oabuhuss updated Jun 6, 2024
Installation issue with version conflicts
#293 opened May 30, 2024 by Huyuling1 updated Jun 2, 2024
Installation issues on linux machine
#291 opened Apr 18, 2024 by chiwwong updated Apr 22, 2024
Installation issue on Mac M3
#278 opened Jan 11, 2024 by earn97 updated Apr 18, 2024
ProTip! no:milestone will show everything without a milestone.