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Read VisiumHD data through SpatialData / Support for Python 3.9
#316
opened Dec 18, 2024 by
marcouderzo
updated Dec 18, 2024
Running time of PTST analysis for Xenium data
#306
opened Jul 18, 2024 by
Ferris01
updated Nov 24, 2024
How to distinguish between sender spots and receiver spots? stlearn distance =200
#315
opened Nov 18, 2024 by
smk5g5
updated Nov 18, 2024
Clarification on Directionality in stLearn CCI Plots
#299
opened Jun 18, 2024 by
gity123987
updated Sep 11, 2024
st.spatial.SME.SME_normalize: ValueError: Input X contains NaN.
#310
opened Sep 9, 2024 by
liangyuli12138
updated Sep 9, 2024
"InvalidIndexError: Reindexing only valid with uniquely valued Index objects" when running st.tl.cci.run with custom LR set
#305
opened Jul 15, 2024 by
je71xusa
updated Jul 15, 2024
Gridding visualization with h&e image out of frame
#304
opened Jul 3, 2024 by
Rabitta99
updated Jul 3, 2024
Image path when creating st object from other packages
#303
opened Jul 3, 2024 by
je71xusa
updated Jul 3, 2024
[Help please] Integrate multiple spatial transcriptomics datasets is not working!
#302
opened Jul 2, 2024 by
MatteoRiva95
updated Jul 3, 2024
numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
#300
opened Jun 18, 2024 by
tangsanpang2
updated Jun 18, 2024
Handling Large Datasets in stLearn and the Impact on Computational Performance
#298
opened Jun 18, 2024 by
gity123987
updated Jun 18, 2024
A problem of quantifying the interaction between two specific cell types and doing spatial mapping
#294
opened Jun 4, 2024 by
XianLZ2301
updated Jun 6, 2024
min_spots vs. the number of total spots in many different lib-size 10x Visium samples
#283
opened Feb 8, 2024 by
cjhong
updated Mar 19, 2024
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