DESCRIPTION

Package: S2IsoMEr
Title: Spatial and Single-Cell Isomeric Metabolite Enrichment in R
Version: 0.5.0
Authors@R: 
    c(
    person("Bishoy", "Wadie", role = c("aut", "cre"), email = "bishoy.wadie@embl.de",
           comment = c(ORCID = "0000-0001-8692-1107")),
    person("Martijn", "Molenaar", role = c("aut"), email = "m.r.molenaar@protonmail.com",
           comment = c(ORCID = "0000-0001-5221-608X")),
    person("Theodore", "Alexandrov", role = c("cph", "fnd"), email = "talexandrov@health.ucsd.edu",
           comment = c(ORCID = "0000-0001-9464-6125"))
           )       
Description: R package performing Overrepresentation analysis (ORA) and Metabolite Set Enrichment Analysis (MSEA) on Spatial and single-cell metabolomics datasets using bootstrapping of isomeric/isobaric molecules.
Imports: 
    pbapply,
    tidyr,
    BWStest,
    utils,
    rlang,
    ggpubr,
    progress,
    fastmatch,
    pheatmap,
    RColorBrewer,
    ggridges,
    yulab.utils,
    tibble,
    stringr,
    stats,
    generics,
    plyr,
    dplyr,
    ggplot2,
    magrittr
Depends: 
    R (>= 3.5.0)
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
LazyData: true
LazyDataCompression: xz
Suggests:
    fgsea,
    BiocParallel,
    testthat (>= 3.0.0),
    knitr,
    rmarkdown
VignetteBuilder: knitr
Language: en-US
Config/testthat/edition: 3
URL: https://alexandrovteam.github.io/S2IsoMEr/
BugReports: https://github.com/alexandrovteam/S2IsoMEr/issues