DESCRIPTION

Package: gatom
Title: Finding an Active Metabolic Module in Atom Transition Network
Version: 0.0.0.9000
Authors@R: person("Alexey", "Sergushichev", email = "alsergbox@gmail.com", role = c("aut", "cre"))
Description: An package for finding active metabolic modules in atom transition network.
biocViews: GeneExpression, DifferentialExpression, Pathways
Depends:
    R (>= 3.5.0)
Imports:
    data.table,
    igraph,
    BioNet,
    plyr,
    methods,
    XML,
    sna,
    intergraph,
    network,
    GGally,
    grid,
    ggplot2,
    mwcsr,
    pryr
Suggests:
    testthat,
    knitr,
    rmarkdown,
    KEGGREST,
    AnnotationDbi,
    org.Mm.eg.db,
    reactome.db,
    fgsea,
    readr,
    BiocStyle,
    R.utils
License: MIT + file LICENCE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
VignetteBuilder: knitr
URL: https://github.com/ctlab/gatom/
BugReports: https://github.com/ctlab/gatom/issues
Remotes: ctlab/mwcsr