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7 changes: 0 additions & 7 deletions docs/delta/api/acls-api.html
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<h1><a href="#access-control-lists" name="access-control-lists" class="anchor"><span class="anchor-link"></span></a>Access Control Lists</h1>
<p>Access Control Lists are rooted in the <code>/v1/acls</code> collection.</p>
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<h1><a href="#archives" name="archives" class="anchor"><span class="anchor-link"></span></a>Archives</h1>
<p>An archive is a collection of resources stored inside an archive file. The archiving format chosen for this purpose is ZIP. Archive resources are rooted in the <code>/v1/archives/{org_label}/{project_label}/</code> collection.</p>
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<h1><a href="#authentication-authorization" name="authentication-authorization" class="anchor"><span class="anchor-link"></span></a>Authentication &amp; Authorization</h1>
<p><strong>Authentication</strong> is the process of validating that users are who they claim to be while <strong>authorization</strong> gives those users permission to access an API resource.</p>
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<h1><a href="#content-negotiation" name="content-negotiation" class="anchor"><span class="anchor-link"></span></a>Content Negotiation</h1>
<p>When performing a request against Nexus Delta, clients can specify the desired format of the response they would like to receive. This is done through a mechanism called <strong>Content Negotiation</strong>. Nexus Delta uses the HTTP <a href="https://developer.mozilla.org/en-US/docs/Web/HTTP/Headers/Accept" title="Accept" target="_blank" rel="noopener noreferrer">Accept</a> Header in order to provide Content Negotiation capabilities.</p>
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<h1><a href="#error-signaling" name="error-signaling" class="anchor"><span class="anchor-link"></span></a>Error Signaling</h1>
<p>Nexus Delta makes use of the HTTP status codes to report the outcome of each API call. The status codes are complemented by a consistent response data model for reporting client and system level failures.</p>
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<h1><a href="#files" name="files" class="anchor"><span class="anchor-link"></span></a>Files</h1>
<p>Files are attachment resources rooted in the <code>/v1/files/{org_label}/{project_label}/</code> collection.</p>
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<h1><a href="#graph-analytics" name="graph-analytics" class="anchor"><span class="anchor-link"></span></a>Graph analytics</h1>
<p>Graph analytics is a feature introduced by the <code>graph-analytics</code> plugin and rooted in the <code>/v1/graph-analytics/{org_label}/{project_label}</code> collection. </p>
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<h1><a href="#history-of-resources" name="history-of-resources" class="anchor"><span class="anchor-link"></span></a>History of resources</h1>
<p>The history endpoint allows to get an overview of the differents events and actions which occured during the lifetime of a resource (creation/update/tag/deprecation) for the different types of resources (generic resources, schemas, files).</p><div class="callout note tip"><div class="callout-title">Authorization notes</div>
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<h1><a href="#id-resolution" name="id-resolution" class="anchor"><span class="anchor-link"></span></a>Id Resolution</h1>
<p>Id Resolution allows to resolve a resource by providing only a resource identifier (the <code>@id</code> value of a resource). In case there are multiple resources with the same identifier across different projects, the response provides all choices for disambiguation.</p><div class="callout note tip"><div class="callout-title">Authorization notes</div>
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<h1><a href="#identities" name="identities" class="anchor"><span class="anchor-link"></span></a>Identities</h1>
<p>The <code>/v1/identities</code> endpoint allows user to retrieve the identities that the user has in the platform. Calling the endpoint without a token will result in only one identity returned: <code>Anonymous</code>. Calling it with token should return multiple identities. There are four different types of identities:</p>
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<h1><a href="#api-reference" name="api-reference" class="anchor"><span class="anchor-link"></span></a>API Reference</h1>
<p>Nexus Delta exposes a RESTful interface over HTTP(S) for synchronous communication. The generally adopted transport format is JSON based, specifically <a href="https://json-ld.org/" title="JSON-LD" target="_blank" rel="noopener noreferrer">JSON-LD</a>. However, other response formats are supported through <a href="content-negotiation.html">Content-Negotiation</a></p>
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7 changes: 0 additions & 7 deletions docs/delta/api/jira.html
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<h1><a href="#jira-integration" name="jira-integration" class="anchor"><span class="anchor-link"></span></a>Jira integration</h1>
<p>The Jira integration plugin comes from the need at BBP to have the Nexus platform and Jira to interact by linking Nexus resources and Jira issues.</p>
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<h1><a href="#multi-fetch" name="multi-fetch" class="anchor"><span class="anchor-link"></span></a>Multi fetch</h1>
<p>The multi-fetch operation allows to get in a given format multiple resources that can live in multiple projects.</p>
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<h1><a href="#organizations" name="organizations" class="anchor"><span class="anchor-link"></span></a>Organizations</h1>
<p>Organizations are rooted in the <code>/v1/orgs</code> path and are used to group and categorize sub-resources.</p><div class="callout note tip"><div class="callout-title">Authorization notes</div>
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<h1><a href="#permissions" name="permissions" class="anchor"><span class="anchor-link"></span></a>Permissions</h1>
<p>Permissions are rooted in the <code>/v1/permissions</code> collection.</p>
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<h1><a href="#projects" name="projects" class="anchor"><span class="anchor-link"></span></a>Projects</h1>
<p>Projects belong to an <code>organization</code> and are rooted in the corresponding <code>/v1/projects/{org_label}</code> path. The purposes of projects are:</p>
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<h1><a href="#quotas" name="quotas" class="anchor"><span class="anchor-link"></span></a>Quotas</h1>
<p>Quotas are rooted in /v1/quotas collection.</p>
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<h1><a href="#realms" name="realms" class="anchor"><span class="anchor-link"></span></a>Realms</h1>
<p>Realms are rooted in <code>/v1/realms</code> collection.</p>
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<h1><a href="#resolvers" name="resolvers" class="anchor"><span class="anchor-link"></span></a>Resolvers</h1>
<p>Resolvers are rooted in the <code>/v1/resolvers/{org_label}/{project_label}</code> collection and are used in the following scenarios:</p>
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<h1><a href="#resources" name="resources" class="anchor"><span class="anchor-link"></span></a>Resources</h1>
<p>Generic resources are rooted in the <code>/v1/resources/{org_label}/{project_label}/{schema_id}</code> collection.</p>
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<h1><a href="#schemas" name="schemas" class="anchor"><span class="anchor-link"></span></a>Schemas</h1>
<p>Schemas are rooted in the <code>/v1/schemas/{org_label}/{project_label}</code> collection. They define a set of rules and constraints using <a href="https://www.w3.org/TR/shacl/" title="SHACL" target="_blank" rel="noopener noreferrer">SHACL</a>. Once those schemas are present, other resources can be created against them. Those resources won&rsquo;t be successfully created unless they match the required constraints defined on the schema.</p>
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<h1><a href="#global-search" name="global-search" class="anchor"><span class="anchor-link"></span></a>Global search</h1>
<p>Nexus provides global search functionality across all projects through the <a href="https://github.com/BlueBrain/nexus/tree/master/delta/plugins/search/src" title="search plugin" target="_blank" rel="noopener noreferrer">search plugin</a>.</p><div class="callout warning "><div class="callout-title">Warning</div>
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<h1><a href="#storages" name="storages" class="anchor"><span class="anchor-link"></span></a>Storages</h1>
<p>Storages are rooted in the <code>/v1/storages/{org_label}/{project_label}</code> collection and are used to describe where <a href="files-api.html">files</a> are physically stored.</p>
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<h1><a href="#supervision" name="supervision" class="anchor"><span class="anchor-link"></span></a>Supervision</h1>
<p>This endpoint returns information about the projections running on the current node.</p>
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<h1><a href="#trial" name="trial" class="anchor"><span class="anchor-link"></span></a>Trial</h1>
<p>Trial operations contain read-only operations designed to help users compose and validate their resources before effectively saving them in Nexus.</p><div class="callout note tip"><div class="callout-title">Authorization notes</div>
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