From a9b23e0611ae3f54c20014b5a030c4674732dd76 Mon Sep 17 00:00:00 2001
From: Spiros Maggioros <spirosastro@gmail.com>
Date: Mon, 28 Oct 2024 14:33:06 +0200
Subject: [PATCH] code fixing for pre-commit

---
 NiChart_DLMUSE/__main__.py |  1 -
 NiChart_DLMUSE/utils.py    | 14 ++++++++------
 setup.py                   |  5 ++---
 3 files changed, 10 insertions(+), 10 deletions(-)

diff --git a/NiChart_DLMUSE/__main__.py b/NiChart_DLMUSE/__main__.py
index 8058f19..b012cc0 100644
--- a/NiChart_DLMUSE/__main__.py
+++ b/NiChart_DLMUSE/__main__.py
@@ -133,7 +133,6 @@ def main() -> None:
     print(args)
     print()
 
-
     if len(os.listdir(out_dir)) != 0:
         print(f"Emptying output folder: {out_dir}...")
         os.system(f"rm -r {out_dir}/*")
diff --git a/NiChart_DLMUSE/utils.py b/NiChart_DLMUSE/utils.py
index 04d7072..f23825c 100644
--- a/NiChart_DLMUSE/utils.py
+++ b/NiChart_DLMUSE/utils.py
@@ -150,12 +150,14 @@ def dir_size(in_dir: str) -> int:
 
 def split_data(in_dir: str, N: int) -> list:
     """
-        Splits the input data directory into subfolders of size.
-        N should be > 0 and the number of files in each subfolder should be > 0 as well.
+    Splits the input data directory into subfolders of size.
+    N should be > 0 and the number of files in each subfolder should be > 0 as well.
     """
     assert N > 0
     data_size = dir_size(in_dir)
-    no_files_in_folders = data_size // N if (data_size % N == 0) else (data_size // N) + 1
+    no_files_in_folders = (
+        data_size // N if (data_size % N == 0) else (data_size // N) + 1
+    )
     assert no_files_in_folders > 0
     subfolders = []
 
@@ -179,15 +181,15 @@ def split_data(in_dir: str, N: int) -> list:
 
 def remove_subfolders(in_dir: str) -> None:
     """
-        Removes all the split_* subolders from the input folder
+    Removes all the split_* subolders from the input folder
     """
     os.system(f"rm -r {in_dir}/split_*")
 
 
 def merge_output_data(in_dir: str) -> None:
     """
-        Takes all the results from the temp_working_fir and moves them into
-        the results/ subfolder in the output folder
+    Takes all the results from the temp_working_fir and moves them into
+    the results/ subfolder in the output folder
     """
 
     os.system(f"mkdir {in_dir}/results")
diff --git a/setup.py b/setup.py
index d020ad4..d8c56a1 100644
--- a/setup.py
+++ b/setup.py
@@ -1,12 +1,11 @@
 from pathlib import Path
 
-import setuptools
 from setuptools import find_packages, setup
 
 this_directory = Path(__file__).parent
 long_description = (this_directory / "README.md").read_text()
 
-with open('requirements.txt') as f:
+with open("requirements.txt") as f:
     required = f.read().splitlines()
 
 
@@ -42,6 +41,6 @@
         "nnunet",
     ],
     package_data={
-        'NiChart_DLMUSE': ['**/*.csv', '**/*.json'],
+        "NiChart_DLMUSE": ["**/*.csv", "**/*.json"],
     },
 )