diff --git a/doc/README.md b/doc/README.md index 28c1c3f8..950f7cdd 100644 --- a/doc/README.md +++ b/doc/README.md @@ -1725,7 +1725,7 @@ The script can be executed directly using the executable file: -• File management: For loop procedure, in the initial phase, the algorithm ingests the best_nanoloops directory along with the properties directory. For curve procedure, the algorithm extract raw SSPFM file measurements.
+• File management: For loop procedure, in the initial phase, the algorithm ingests the best_nanoloops directory along with the properties directory, and the property folder contains the parameters.txt file generated after steps 1 and 2 of the analysis. For curve procedure, the algorithm extract raw SSPFM file measurements and the property folder contains the measurement sheet model SSPFM file measurement_sheet_parameters.csv.
• Common (user) parameters: all parameters common to the entire (both loop or curve) clustering analysis. Two distinct clustering algorithms exist: one for loops and the other for curves, specified with the object parameter.
• Loop parameters: all parameters common to the analysis of a clustering associated with a loop (best nanoloops generated after the second processing step).
• Curve parameters: all parameters common to the analysis of a clustering associated with a curve (raw SSPFM measurement channels).