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Accommodate tumor cell receptor ligand interactions in cytokine network display #9

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vthorsson opened this issue Dec 3, 2019 · 2 comments
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@vthorsson
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Allow tumor cells to be included in extracellular network module if results are available

@heimannch
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Do we have an annotation of all receptors and ligands that interact with tumor cells (perhaps from the cell-image module)?

@vthorsson
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vthorsson commented Dec 12, 2019

Indeed, from the cell-image diagram we have some examples of these to work from.
The attached can serve as an example file to start from (text "Tumor_cell" can be changed to whatever is most appropriate for input )

CellImage_InteractionPairs.tsv.gz

@andrewelamb andrewelamb transferred this issue from CRI-iAtlas/shiny-iatlas Feb 5, 2020
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