Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Reader for Mosaic files #54

Merged
merged 25 commits into from
Jan 31, 2018
Merged

Conversation

gsergeant
Copy link
Member

Added a reader for the Mosaic tracking plugin, as per issue #36 .
These files can be saved in multiple extension formats (csv, tsv, txt -- uses ImageJ Results tables), so I've changed the delegator for these cases.

With pandas, the engine now auto-determines the separator and creates the correct reader class according to the first term in the header. This partially addresses #16 for now, at least for these three extensions.

Also fixes the minor indentation bug for #40

@simleo
Copy link
Member

simleo commented Dec 10, 2017

Travis build is broken. Frictionless moved to >= 1.0 versions of their packages and renamed jsontableschema to tableschema, but it looks like both are being installed and this ends up triggering an ImportError. I've tried simply changing the datapackage dep to datapackage < 1.0 but it's not enough.

@agbeltran
Copy link
Member

@gsergeant could you please investigate why the build is failing? Please, assume the dependency is for datapackage < 1.0. Thanks!

@gsergeant
Copy link
Member Author

Ensuring the datapackage version seems to have worked.

Excuse the seemingly extra re-commits, I essentially just rebased the branch.

@agbeltran
Copy link
Member

agbeltran commented Jan 31, 2018

Brilliant! I see that you added some documentation/examples, which is great. Have you also got some tests (sorry if I missed them)?

@gsergeant
Copy link
Member Author

That I forgot, but will add it now.

Copy link
Member

@agbeltran agbeltran left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I fixed a minor typo in the test and I think it is now good to go

@agbeltran agbeltran merged commit 846b72c into CellMigStandOrg:master Jan 31, 2018
@sbesson sbesson added this to the 0.4.0 milestone Feb 12, 2018
This was referenced Mar 20, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

5 participants