build fmriprep with pyslicetime
apt install docker-io singularity-container
docker build . -t fmriprep:pyslicetime
docker tag fmriprep:pyslicetime charestlab/fmriprep:pyslicetime
docker push charestlab/fmriprep:pyslicetime
singularity build Images/fmriprep-pyslicetime.simg docker://charestlab/fmriprep:pyslicetime
test on castles:
scp Images/fmriprep-pyslicetime.simg orange:~
scp pyslicetime_fmriprep.sh orange:~
scp pyslicetime_fmriprep_slurm_batch.sh orange:~