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references.bib
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@article{hsu2021,
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@misc{mogsa,
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title = {Correspondence analysis for dimension reduction, batch integration, and visualization of single-cell RNA-seq data},
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title = {Dimension reduction techniques for the integrative analysis of multi-omics data},
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@article{Meng2019,
title = {MOGSA: Integrative Single Sample Gene-set Analysis of Multiple Omics Data},
author = {Meng, Chen and Basunia, Azfar and Peters, Bjoern and Gholami, Amin Moghaddas and Kuster, Bernhard and Culhane, {Aedín C.}},
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number = {8},
doi = {10.1074/mcp.tir118.001251},
url = {http://dx.doi.org/10.1074/mcp.TIR118.001251},
langid = {en}
}
@inbook{Meng2016a,
title = {Integrative Exploratory Analysis of Two or More Genomic Datasets},
author = {Meng, Chen and Culhane, Aedin},
year = {2016},
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publisher = {Springer New York},
pages = {19--38},
doi = {10.1007/978-1-4939-3578-9_2},
url = {http://dx.doi.org/10.1007/978-1-4939-3578-9_2}
}
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}
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@article{Meng2019,
title = {MOGSA: Integrative Single Sample Gene-set Analysis of Multiple Omics Data},
author = {Meng, Chen and Basunia, Azfar and Peters, Bjoern and Gholami, Amin Moghaddas and Kuster, Bernhard and Culhane, {Aedín C.}},
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Onur and Sun, Yichao and Taylor, Barry S. and Wang, Jioajiao and Zhang, Hongxin and Anur, Pavana and Peto, Myron and Spellman, Paul and Benz, Christopher and Stuart, Joshua M. and Wong, Christopher K. and Yau, Christina and Hayes, D. Neil and Parker, Joel S. and Wilkerson, Matthew D. and Ally, Adrian and Balasundaram, Miruna and Bowlby, Reanne and Brooks, Denise and Carlsen, Rebecca and Chuah, Eric and Dhalla, Noreen and Holt, Robert and Jones, Steven J.M. and Kasaian, Katayoon and Lee, Darlene and Ma, Yussanne and Marra, Marco A. and Mayo, Michael and Moore, Richard A. and Mungall, Andrew J. and Mungall, Karen and Robertson, A. Gordon and Sadeghi, Sara and Schein, Jacqueline E. and Sipahimalani, Payal and Tam, Angela and Thiessen, Nina and Tse, Kane and Wong, Tina and Berger, Ashton C. and Beroukhim, Rameen and Cherniack, Andrew D. and Cibulskis, Carrie and Gabriel, Stacey B. and Gao, Galen F. and Ha, Gavin and Meyerson, Matthew and Schumacher, Steven E. and Shih, Juliann and Kucherlapati, Melanie H. and Kucherlapati, Raju S. and Baylin, Stephen and Cope, Leslie and Danilova, Ludmila and Bootwalla, Moiz S. and Lai, Phillip H. and Maglinte, Dennis T. and Van Den Berg, David J. and Weisenberger, Daniel J. and Auman, J. Todd and Balu, Saianand and Bodenheimer, Tom and Fan, Cheng and Hoadley, Katherine A. and Hoyle, Alan P. and Jefferys, Stuart R. and Jones, Corbin D. and Meng, Shaowu and Mieczkowski, Piotr A. and Mose, Lisle E. and Perou, Amy H. and Perou, Charles M. and Roach, Jeffrey and Shi, Yan and Simons, Janae V. and Skelly, Tara and Soloway, Matthew G. and Tan, Donghui and Veluvolu, Umadevi and Fan, Huihui and Hinoue, Toshinori and Laird, Peter W. and Shen, Hui and Zhou, Wanding and Bellair, Michelle and Chang, Kyle and Covington, Kyle and Creighton, Chad J. and Dinh, Huyen and Doddapaneni, HarshaVardhan and Donehower, Lawrence A. and Drummond, Jennifer and Gibbs, Richard A. and Glenn, Robert and Hale, Walker and Han, Yi and Hu, Jianhong and Korchina, Viktoriya and Lee, Sandra and Lewis, Lora and Li, Wei and Liu, Xiuping and Morgan, Margaret and Morton, Donna and Muzny, Donna and Santibanez, Jireh and Sheth, Margi and Shinbrot, Eve and Wang, Linghua and Wang, Min and Wheeler, David A. and Xi, Liu and Zhao, Fengmei and Hess, Julian and Appelbaum, Elizabeth L. and Bailey, Matthew and Cordes, Matthew G. and Ding, Li and Fronick, Catrina C. and Fulton, Lucinda A. and Fulton, Robert S. and Kandoth, Cyriac and Mardis, Elaine R. and McLellan, Michael D. and Miller, Christopher A. and Schmidt, Heather K. and Wilson, Richard K. and Crain, Daniel and Curley, Erin and Gardner, Johanna and Lau, Kevin and Mallery, David and Morris, Scott and Paulauskis, Joseph and Penny, Robert and Shelton, Candace and Shelton, Troy and Sherman, Mark and Thompson, Eric and Yena, Peggy and Bowen, Jay and Gastier-Foster, Julie M. and Gerken, Mark and Leraas, Kristen M. and Lichtenberg, Tara M. and Ramirez, Nilsa C. and Wise, Lisa and Zmuda, Erik and Corcoran, Niall and Costello, Tony and Hovens, Christopher and Carvalho, Andre L. and de Carvalho, Ana C. and Fregnani, {José H.} and Longatto-Filho, Adhemar and Reis, Rui M. and Scapulatempo-Neto, Cristovam and Silveira, Henrique C.S. and Vidal, Daniel O. and Burnette, Andrew and Eschbacher, Jennifer and Hermes, Beth and Noss, Ardene and Singh, Rosy and Anderson, Matthew L. and Castro, Patricia D. and Ittmann, Michael and Huntsman, David and Kohl, Bernard and Le, Xuan and Thorp, Richard and Andry, Chris and Duffy, Elizabeth R. and Lyadov, Vladimir and Paklina, Oxana and Setdikova, Galiya and Shabunin, Alexey and Tavobilov, Mikhail and McPherson, Christopher and Warnick, Ronald and Berkowitz, Ross and Cramer, Daniel and Feltmate, Colleen and Horowitz, Neil and Kibel, Adam and Muto, Michael and Raut, Chandrajit P. and Malykh, Andrei and Barnholtz-Sloan, Jill S. and Barrett, Wendi and Devine, Karen and Fulop, Jordonna and Ostrom, Quinn T. and Shimmel, Kristen and Wolinsky, Yingli and Sloan, Andrew E. and De Rose, Agostino and Giuliante, Felice and Goodman, Marc and Karlan, Beth Y. and Hagedorn, Curt H. and Eckman, John and Harr, Jodi and Myers, Jerome and Tucker, Kelinda and Zach, Leigh Anne and Deyarmin, Brenda and Hu, Hai and Kvecher, Leonid and Larson, Caroline and Mural, Richard J. and Somiari, Stella and Vicha, Ales and Zelinka, Tomas and Bennett, Joseph and Iacocca, Mary and Rabeno, Brenda and Swanson, Patricia and Latour, Mathieu and Lacombe, Louis and {Têtu}, Bernard and Bergeron, Alain and McGraw, Mary and Staugaitis, Susan M. and Chabot, John and Hibshoosh, Hanina and Sepulveda, Antonia and Su, Tao and Wang, Timothy and Potapova, Olga and Voronina, Olga and Desjardins, Laurence and Mariani, Odette and Roman-Roman, Sergio and Sastre, Xavier and Stern, Marc-Henri and Cheng, Feixiong and Signoretti, Sabina and Berchuck, Andrew and Bigner, Darell and Lipp, Eric and Marks, Jeffrey and McCall, Shannon and McLendon, Roger and Secord, Angeles and Sharp, Alexis and Behera, Madhusmita and Brat, Daniel J. and Chen, Amy and Delman, Keith and Force, Seth and Khuri, Fadlo and Magliocca, Kelly and Maithel, Shishir and Olson, Jeffrey J. and Owonikoko, Taofeek and Pickens, Alan and Ramalingam, Suresh and Shin, Dong M. and Sica, Gabriel and Van Meir, Erwin G. and Zhang, Hongzheng and Eijckenboom, Wil and Gillis, Ad and Korpershoek, Esther and Looijenga, Leendert and Oosterhuis, Wolter and Stoop, Hans and van Kessel, Kim E. and Zwarthoff, Ellen C. and Calatozzolo, Chiara and Cuppini, Lucia and Cuzzubbo, Stefania and DiMeco, Francesco and Finocchiaro, Gaetano and Mattei, Luca and Perin, Alessandro and Pollo, Bianca and Chen, Chu and Houck, John and Lohavanichbutr, Pawadee and Hartmann, Arndt and Stoehr, Christine and Stoehr, Robert and Taubert, Helge and Wach, Sven and Wullich, Bernd and Kycler, Witold and Murawa, Dawid and Wiznerowicz, Maciej and Chung, Ki and Edenfield, W. Jeffrey and Martin, Julie and Baudin, Eric and Bubley, Glenn and Bueno, Raphael and De Rienzo, Assunta and Richards, William G. and Kalkanis, Steven and Mikkelsen, Tom and Noushmehr, Houtan and Scarpace, Lisa and Girard, Nicolas and Aymerich, Marta and Campo, Elias and {Giné}, Eva and Guillermo, {Armando López} and Van Bang, Nguyen and Hanh, Phan Thi and Phu, Bui Duc and Tang, Yufang and Colman, Howard and Evason, Kimberley and Dottino, Peter R. and Martignetti, John A. and Gabra, Hani and Juhl, Hartmut and Akeredolu, Teniola and Stepa, Serghei and Hoon, Dave and Ahn, Keunsoo and Kang, Koo Jeong and Beuschlein, Felix and Breggia, Anne and Birrer, Michael and Bell, Debra and Borad, Mitesh and Bryce, Alan H. and Castle, Erik and Chandan, Vishal and Cheville, John and Copland, John A. and Farnell, Michael and Flotte, Thomas and Giama, Nasra and Ho, Thai and Kendrick, Michael and Kocher, Jean-Pierre and Kopp, Karla and Moser, Catherine and Nagorney, David and {O{\textquoteright}Brien}, Daniel and {O{\textquoteright}Neill}, Brian Patrick and Patel, Tushar and Petersen, Gloria and Que, Florencia and Rivera, Michael and Roberts, Lewis and Smallridge, Robert and Smyrk, Thomas and Stanton, Melissa and Thompson, R. 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