makedocker

#!/bin/bash
if [ $# == 0 ]
then
    echo "Make a concore study in docker"
    echo "  ./makedocker path/name.graphml"
    echo "  ./makedocker path/name.graphml study"
    echo "In the first case, the name of the study is the same as the name of the .graphml"
    echo "In either case, source files come from the same path as the .graphml"
    echo "The equivalent mkconcore.py is displayed"
    exit
fi
graphml=$1
if [ -e $graphml ]
then
    sourcedir=$(dirname "$graphml")
else
    graphml=$graphml'.graphml'
    if [ -e $graphml ]
    then
        sourcedir=$(dirname "$graphml")
    else
        echo "$graphml does not exist"
        exit
    fi
fi
if [ $# = 1 ]
then
    studydir=`basename ${graphml%\.*}`
else
    studydir=$2
fi
if [ -e $studydir ]
then
    echo "cannot make $studydir because one already exists with that name"
    echo "either do ./destroy $studydir, or choose a unique name as 2nd arg"
else
    echo "python3 mkconcore.py $graphml $sourcedir $studydir docker"
    python3 mkconcore.py $graphml $sourcedir $studydir docker
fi