Makefile

.PHONY: compile, clean, recompile

compile:
	python setup.py build_ext --inplace
	rm -fr build

# The reconstruction/ecoli/dataclasses/process/*.py files were generated by
#  write_ode_file.py in Parca code.
# Fireworks writes launcher_20* and block_20*.
# `aesara-cache clear` clears the current $(aesara-cache) cache, not others, and
# leaves 3 small *.delete.me dirs for later in case they're in use, esp. on NFS.
clean:
	rm -fr fixtures cache
	(cd reconstruction/ecoli/dataclasses/process && rm -f equilibrium_odes.py two_component_system_odes*.py)
	find . -name "*.pyc" -exec rm -rf {} +
	find . -name "*.o" -exec rm -fr {} +
	find . -name "*.so" -exec rm -fr {} +
	rm -fr build
	rm -fr launcher_20* block_20*
	if [ "`aesara-cache | xargs du -sm | cut -f1`" -gt 30 ]; then \
		echo "Clearing the aesara-cache since it's larger than threshold."; \
		aesara-cache clear; \
	fi

# Delete just the *.so libraries then (re)compile them.
# This is useful when switching to a different Python virtualenv.
recompile:
	find . -name "*.so" -delete
	make compile