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Improve documentation of components of variance #135

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brandon-gallas opened this issue Dec 7, 2017 · 3 comments
Open

Improve documentation of components of variance #135

brandon-gallas opened this issue Dec 7, 2017 · 3 comments
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@brandon-gallas
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Receveived by email:

What are the differences among these rows?

modalityA modalityB UstatOrMLE compOrCoeff M1 M2 M3 M4 M5 M6 M7 M8
dbt ffdm Ustat comp_A 9.30E-01 8.92E-01 8.71E-01 8.65E-01 9.23E-01 8.92E-01 8.70E-01 8.65E-01
dbt ffdm Ustat coeff_A 3.98E-06 1.27E-03 1.56E-03 4.97E-01 3.98E-06 1.27E-03 1.56E-03 -5.03E-01
dbt ffdm Ustat comp_B 8.38E-01 7.50E-01 7.33E-01 7.02E-01 8.17E-01 7.49E-01 7.32E-01 7.02E-01
dbt ffdm Ustat coeff_B 3.97E-06 1.27E-03 1.56E-03 4.97E-01 3.97E-06 1.27E-03 1.56E-03 -5.03E-01
dbt ffdm Ustat comp_product 0.00E+00 8.02E-01 0.00E+00 7.79E-01 0.00E+00 8.02E-01 0.00E+00 7.79E-01
dbt ffdm Ustat coeff_product 0.00E+00 2.54E-03 0.00E+00 9.97E-01 0.00E+00 2.54E-03 0.00E+00 ########
dbt ffdm Ustat total 7.02E-06 4.09E-05 2.50E-03 1.68E-03 6.91E-06 3.93E-05 2.50E-03 -6.59E-03
@brandon-gallas
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When I looked for a description in the documentation, I felt it was perhaps in the wrong place and it was incomplete. I found the description of the “Components of Variance” in the “Methods section”, but maybe a more visual description of the output could be put in the “Input and output section” and the two sections can reference each other.

Please update the documentation.

@qigongFDA
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Rewrite output files section, compile manuals, and upload to github.

@qigongFDA
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Add table in 4.2.3 Analyze All Modalities page to explain BDG table. After check it, we can close this issue.

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