R-CMD-check.yml

on:
  push:
    branches:
      - main
  pull_request:
    branches:
      - main

name: R-CMD-check

jobs:
  R-CMD-check:
    runs-on: ubuntu-20.04
    env:
      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
      _R_CHECK_TESTS_NLINES_: 0
      NOT_CRAN: true
    steps:
      - uses: actions/checkout@v2

      - uses: r-lib/actions/setup-r@v1

      - name: Query dependencies
        run: |
          install.packages('remotes')
          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
        shell: Rscript {0}

      - name: Cache R packages
        if: runner.os != 'Windows'
        uses: actions/cache@v2
        with:
          path: ${{ env.R_LIBS_USER }}
          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

      - name: Install system dependencies
        if: runner.os == 'Linux'
        env:
          RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
        run: |
          Rscript -e "remotes::install_github('r-hub/sysreqs')"
          sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
          sudo -s eval "$sysreqs"

      - name: Install dependencies
        run: |
          install.packages(c("remotes"))
          remotes::install_deps(dependencies = TRUE)
          remotes::install_cran("rcmdcheck")
          remotes::install_cran("covr")
        shell: Rscript {0}

      - name: Check
        run: rcmdcheck::rcmdcheck(args = c("--ignore-vignettes", "--no-manual"), build_args = c("--no-build-vignettes"), error_on = "error", check_dir = "check")
        shell: Rscript {0}

      - name: Upload check results
        if: failure()
        uses: actions/upload-artifact@v3
        with:
          name: results
          path: check

      - name: Test coverage
        run: covr::codecov()
        shell: Rscript {0}