NAMESPACE

# Generated by roxygen2: do not edit by hand

export(aggregateBarcodes)
export(calcDivIndexes)
export(calcPercentileBarcodes)
export(calcReplicateCorr)
export(collapseReplicates)
export(compareAbundance)
export(filterBarcodes)
export(getDominantBarcodes)
export(normaliseCounts)
export(plotAbundanceLines)
export(plotBARtabFilterQC)
export(plotBARtabMapQC)
export(plotBarcodeBoxplot)
export(plotBarcodeBubble)
export(plotBarcodeCorrelation)
export(plotBarcodeCounts)
export(plotBarcodeCumSum)
export(plotBarcodeDistance)
export(plotBarcodeHeatmap)
export(plotBarcodeHistogram)
export(plotBarcodePCA)
export(plotBarcodeRegression)
export(plotBarcodeTimeseries)
export(plotBarcodesPerCell)
export(plotCellsInClusters)
export(plotCellsPerGroup)
export(plotClusterEnrichment)
export(plotDetectedBarcodes)
export(plotDivIndexes)
export(plotMetrics)
export(plotOrderedBubble)
export(plotReadCounts)
export(plotSampleCumSum)
export(plotUmiFilterThresholds)
export(plotUmiPerBarcode)
export(processBarcodeLibrary)
export(readBartabCounts)
export(thresholdCounts)
export(calculateBarcodeSimilarities)
export(plotBarcodeSimilarity)
export(barcodesToClones)
export(aggregateBarcodesClones)
import(edgeR)
import(ggplot2)
importFrom(ineq,Gini)
importFrom(magrittr,"%>%")
importFrom(rlang,.data)
importFrom(vegan,diversity)