build-and-test.yml

name: Build and Test

on:
  push:
    branches:
      - main
    paths-ignore:
      - '*.md'
      - '.github/**'
  pull_request:
    branches: [ '**' ]
    # There is an issue with GitHub required checks and paths-ignore. We don't really need to
    # run the tests if there are only irrelevant changes (see paths-ignore above). However,
    # we require tests to pass by making a "required check" rule on the branch. If the action
    # is not triggered, the required check never passes and you are stuck. Therefore, we have
    # to run tests even when we only change a markdown file. So don't do what I did and put a
    # paths-ignore right here!
  workflow_dispatch: {}

jobs:
  bump-check:
    runs-on: ubuntu-latest
    outputs:
      is-bump: ${{ steps.skiptest.outputs.is-bump }}
    steps:
      - uses: actions/checkout@v2
      - name: Skip version bump merges
        id: skiptest
        uses: ./.github/actions/bump-skip
        with:
          event-name: ${{ github.event_name }}

  build:
    needs: [ bump-check ]
    runs-on: ubuntu-latest
    if: needs.bump-check.outputs.is-bump == 'no'
    steps:
      - uses: actions/checkout@v2
      - name: Set up JDK
        uses: actions/setup-java@v2
        with:
          java-version: '17'
          distribution: 'temurin'
          cache: 'gradle'

      - name: Build the test harness and, by dependency, the service library
        run: ./gradlew --build-cache build -x test

      - name: Upload spotbugs results
        uses: github/codeql-action/upload-sarif@main
        with:
          sarif_file: service/build/reports/spotbugs/main.sarif

  jib:
    needs: [ build ]
    runs-on: ubuntu-latest

    steps:
      - uses: actions/checkout@v2
      - name: Set up JDK
        uses: actions/setup-java@v2
        with:
          java-version: '17'
          distribution: 'temurin'
          cache: 'gradle'

      - name: Construct docker image name and tag
        id: image-name
        run: |
          GITHUB_REPO=$(basename ${{ github.repository }})
          GIT_SHORT_HASH=$(git rev-parse --short HEAD)
          echo ::set-output name=name::${GITHUB_REPO}:${GIT_SHORT_HASH}

      - name: Build image locally with jib
        run: |
          ./gradlew --build-cache :service:jibDockerBuild \
            --image=${{ steps.image-name.outputs.name }} \
            -Djib.console=plain

      - name: Run Trivy vulnerability scanner
        uses: broadinstitute/dsp-appsec-trivy-action@v1
        with:
          image: ${{ steps.image-name.outputs.name }}

  tests-and-sonarqube:
    needs: [ bump-check, build ]
    runs-on: ubuntu-latest
    if: needs.bump-check.outputs.is-bump == 'no'

    services:
      postgres:
        image: postgres:13.1
        env:
          POSTGRES_PASSWORD: postgres
        options: >-
          --health-cmd pg_isready
          --health-interval 10s
          --health-timeout 5s
          --health-retries 5
        ports:
          - 5432:5432

    steps:
      - uses: actions/checkout@v2
        # Needed by sonar to get the git history for the branch the PR will be merged into.
        with:
          fetch-depth: 0
      - name: Set up JDK
        uses: actions/setup-java@v2
        with:
          java-version: '17'
          distribution: 'temurin'
          cache: 'gradle'

      - name: initialize the database
        env:
          PGPASSWORD: postgres
        run: |
          psql -h localhost -U postgres -f ./scripts/postgres-init.sql

      - name: Test with coverage
        run: ./gradlew --build-cache service:test jacocoTestReport --scan

      # The SonarQube scan is done here, so it can upload the coverage report generated by the tests.
      - name: SonarQube scan
        run: ./gradlew --build-cache sonarqube
        env:
          SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }}
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}



  notify-slack:
    needs: [ bump-check, build, tests-and-sonarqube ]
    runs-on: ubuntu-latest
    if: failure() && github.event_name == 'push' && needs.bump-check.outputs.is-bump == 'no'

    steps:
      - name: Notify WSM Slack on Failure
        uses: broadinstitute/action-slack@v3.8.0
        # see https://github.com/broadinstitute/action-slack
        env:
          SLACK_WEBHOOK_URL: ${{ secrets.SLACK_WEBHOOK_URL }}
        with:
          status: failure
          channel: "#terra-tsps-alerts"
          username: "TSPS push to main branch"
          author_name: "build-and-test"
          icon_emoji: ":triangular_ruler:"
          fields: job, commit