Bump mypy from 1.11.2 to 1.12.0 (#5124)

* Bump mypy from 1.11.2 to 1.12.0 Bumps [mypy](https://github.com/python/mypy) from 1.11.2 to 1.12.0. - [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md) - [Commits](python/mypy@v1.11.2...v1.12.0) --- updated-dependencies: - dependency-name: mypy dependency-type: direct:development update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> * Update mypy type. --------- Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: DailyDreaming <[email protected]>
DataBiosphere · Oct 21, 2024 · a8a972f · a8a972f
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diff --git a/requirements-dev.txt b/requirements-dev.txt
@@ -9,7 +9,7 @@ astroid>=3,<4
 sphinx-autodoc-typehints>=1.24.0,<3
 sphinxcontrib-autoprogram==0.1.9
 cwltest>=2.2.20211116163652
-mypy==1.11.2
+mypy==1.12.0
 types-aws-xray-sdk
 types-boto<2.49.18.20240807
 types-Flask-Cors

diff --git a/src/toil/common.py b/src/toil/common.py
@@ -1440,8 +1440,7 @@ def _runMainLoop(self, rootJob: "JobDescription") -> Any:
         """
         logProcessContext(self.config)
 
-        with RealtimeLogger(self._batchSystem,
-                            level=self.options.logLevel if self.options.realTimeLogging else None):
+        with RealtimeLogger(self._batchSystem, level=self.options.logLevel if self.options.realTimeLogging else 'INFO'):
             # FIXME: common should not import from leader
             from toil.leader import Leader
             return Leader(config=self.config,