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Module crash with sitk Error OutputLabel.nrrd does not exist #11

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yh3ds opened this issue Sep 12, 2018 · 2 comments
Open

Module crash with sitk Error OutputLabel.nrrd does not exist #11

yh3ds opened this issue Sep 12, 2018 · 2 comments

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@yh3ds
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yh3ds commented Sep 12, 2018

While tryting to run DeepInfer with CT Bone Segmenter under 3D Slicer 4.8.1 (build myself), I get the following error and the process stops :
sitk::ERROR: The file "LocalPath.deepinfer.tmp\OutputLabel.nrrd" does not exist.

@mlmms
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mlmms commented Feb 11, 2019

I have downloaded the new Slicer 4.10.1 and, while running DeepInfer with 'Prostate Gland Segmenter', I get the following errors and the process stops:
RuntimeError: Exception thrown in SimpleITK ReadImage: D:\D\S\Slicer-4101-build\SimpleITK\Code\IO\src\sitkImageReaderBase.cxx:89:
sitk::ERROR: The file "C:\Users\CCIG.deepinfer.tmp\OutputLabel.nrrd" does not exist.

@mehrtash @gpernelle @kmader @mpslxz Thank you.

@andreped
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andreped commented Aug 7, 2019

Same problem here using 3D Slicer 4.10.2 (Ubuntu 18.04). Running Slicer as sudo from the terminal did not fix the problem. The main problem lies here:
[nrrd] nrrdSave: couldn't fopen("/home/deepinfer/data/OutputLabel.nrrd","wb"): Permission denied

Thus, the file cannot be created, and hence it doesn't exist later on.

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3 participants