From d73637193011a8a7fc08c1812b9238e1e27f5f54 Mon Sep 17 00:00:00 2001 From: Martijn Visser Date: Mon, 16 Oct 2023 22:17:48 +0200 Subject: [PATCH 1/7] get pydantic v2 Does not yet work with ribasim-python. --- environment.yml | 2 +- pixi.lock | 4971 ++++++++++++++++++--------------- pixi.toml | 2 +- python/ribasim/pyproject.toml | 2 +- 4 files changed, 2660 insertions(+), 2317 deletions(-) diff --git a/environment.yml b/environment.yml index d6283cc17..0d1ecf473 100644 --- a/environment.yml +++ b/environment.yml @@ -20,7 +20,7 @@ dependencies: - quartodoc - pre-commit - pyarrow - - pydantic=1 + - pydantic - pyogrio - pytest - pytest-cov diff --git a/pixi.lock b/pixi.lock index 0e9396ce9..910478d9d 100644 --- a/pixi.lock +++ b/pixi.lock @@ -77,6 +77,72 @@ package: license_family: GPL size: 554938 timestamp: 1693607226431 +- name: annotated-types + version: 0.6.0 + manager: conda + platform: linux-64 + dependencies: + python: '>=3.7' + typing-extensions: '>=4.0.0' + url: https://conda.anaconda.org/conda-forge/noarch/annotated-types-0.6.0-pyhd8ed1ab_0.conda + hash: + md5: 997c29372bdbe2afee073dff71f35923 + sha256: 3a2c98154d95cfd54daba6b7d507d31f5ba07ac2ad955c44eb041b66563193cd + optional: false + category: main + build: pyhd8ed1ab_0 + arch: x86_64 + subdir: linux-64 + build_number: 0 + license: MIT + license_family: MIT + noarch: python + size: 17026 + timestamp: 1696634393637 +- name: annotated-types + version: 0.6.0 + manager: conda + platform: osx-64 + dependencies: + python: '>=3.7' + typing-extensions: '>=4.0.0' + url: https://conda.anaconda.org/conda-forge/noarch/annotated-types-0.6.0-pyhd8ed1ab_0.conda + hash: + md5: 997c29372bdbe2afee073dff71f35923 + sha256: 3a2c98154d95cfd54daba6b7d507d31f5ba07ac2ad955c44eb041b66563193cd + optional: false + category: main + build: pyhd8ed1ab_0 + arch: x86_64 + subdir: osx-64 + build_number: 0 + license: MIT + license_family: MIT + noarch: python + size: 17026 + timestamp: 1696634393637 +- name: annotated-types + version: 0.6.0 + manager: conda + platform: win-64 + dependencies: + python: '>=3.7' + typing-extensions: '>=4.0.0' + url: https://conda.anaconda.org/conda-forge/noarch/annotated-types-0.6.0-pyhd8ed1ab_0.conda + hash: + md5: 997c29372bdbe2afee073dff71f35923 + sha256: 3a2c98154d95cfd54daba6b7d507d31f5ba07ac2ad955c44eb041b66563193cd + optional: false + category: main + build: pyhd8ed1ab_0 + arch: x86_64 + subdir: win-64 + build_number: 0 + license: MIT + license_family: MIT + noarch: python + size: 17026 + timestamp: 1696634393637 - 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name: xmipy version: 1.3.1 manager: conda @@ -25198,7 +25542,7 @@ package: size: 27433 timestamp: 1685453649160 - name: xorg-libx11 - version: 1.8.6 + version: 1.8.7 manager: conda platform: linux-64 dependencies: @@ -25207,10 +25551,10 @@ package: xorg-kbproto: '*' xorg-xextproto: '>=7.3.0,<8.0a0' xorg-xproto: '*' - url: https://conda.anaconda.org/conda-forge/linux-64/xorg-libx11-1.8.6-h8ee46fc_0.conda + url: https://conda.anaconda.org/conda-forge/linux-64/xorg-libx11-1.8.7-h8ee46fc_0.conda hash: - md5: 7590b76c3d11d21caa44f3fc38ac584a - sha256: 3360f81f7687179959a6bf1c762938240172e8bb3aef957e0a14fb12a0b7c105 + md5: 49e482d882669206653b095f5206c05b + sha256: 7a02a7beac472ae2759498550b5fc5261bf5be7a9a2b4648a3f67818a7bfefcf optional: false category: main build: h8ee46fc_0 @@ -25219,8 +25563,8 @@ package: build_number: 0 license: MIT license_family: MIT - size: 828510 - timestamp: 1686866595393 + size: 828692 + timestamp: 1697056910935 - name: xorg-libxau version: 1.0.11 manager: conda @@ -25465,15 +25809,15 @@ package: size: 74922 timestamp: 1607291557628 - name: xyzservices - version: 2023.7.0 + version: 2023.10.0 manager: conda platform: linux-64 dependencies: python: '>=3.8' - url: https://conda.anaconda.org/conda-forge/noarch/xyzservices-2023.7.0-pyhd8ed1ab_0.conda + url: https://conda.anaconda.org/conda-forge/noarch/xyzservices-2023.10.0-pyhd8ed1ab_0.conda hash: - md5: aacae3c0eaba0204dc6c5497c93c7992 - sha256: 3ca07b5255b4f9b350994bbe4482d44f9d9334610215af5ae174c8c8b99994e4 + md5: 9c6fe7db9c9133ade38b9a5011103243 + sha256: 21662312078b887bcc5818695e871d81ad87b60eec73f9f8fa35c8f5d4252608 optional: false category: main build: pyhd8ed1ab_0 @@ -25483,18 +25827,18 @@ package: license: BSD-3-Clause license_family: BSD noarch: python - size: 36307 - timestamp: 1689285902230 + size: 36406 + timestamp: 1696506575491 - name: xyzservices - version: 2023.7.0 + version: 2023.10.0 manager: conda platform: osx-64 dependencies: python: '>=3.8' - url: https://conda.anaconda.org/conda-forge/noarch/xyzservices-2023.7.0-pyhd8ed1ab_0.conda + url: https://conda.anaconda.org/conda-forge/noarch/xyzservices-2023.10.0-pyhd8ed1ab_0.conda hash: - 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size: 36307 - timestamp: 1689285902230 + size: 36406 + timestamp: 1696506575491 - name: xz version: 5.2.6 manager: conda @@ -25645,48 +25989,47 @@ package: size: 63274 timestamp: 1641347623319 - name: zeromq - version: 4.3.4 + version: 4.3.5 manager: conda platform: linux-64 dependencies: - libgcc-ng: '>=9.4.0' + libgcc-ng: '>=12' libsodium: '>=1.0.18,<1.0.19.0a0' - libstdcxx-ng: '>=9.4.0' - url: https://conda.anaconda.org/conda-forge/linux-64/zeromq-4.3.4-h9c3ff4c_1.tar.bz2 + libstdcxx-ng: '>=12' + url: https://conda.anaconda.org/conda-forge/linux-64/zeromq-4.3.5-h59595ed_0.conda hash: - md5: 21743a8d2ea0c8cfbbf8fe489b0347df - sha256: 525315b0df21866d4c3d68bc2ff987d26c2fdf0e3e8fd242c49b7255adef04c6 + md5: 8851084c192dbc56215ac4e3c9aa30fa + sha256: 53bf2a18224406e9806adb3b270a2c8a028aca0c89bd40114a85d6446f5c98d1 optional: false category: main - build: h9c3ff4c_1 + build: h59595ed_0 arch: x86_64 subdir: linux-64 - build_number: 1 - license: LGPL-3.0-or-later - license_family: LGPL - size: 359709 - timestamp: 1629967303309 + build_number: 0 + license: MPL-2.0 + size: 343455 + timestamp: 1697056638125 - name: zeromq - version: 4.3.4 + version: 4.3.5 manager: conda platform: osx-64 dependencies: - libcxx: '>=11.1.0' + __osx: '>=10.9' + libcxx: '>=16.0.6' libsodium: '>=1.0.18,<1.0.19.0a0' - url: https://conda.anaconda.org/conda-forge/osx-64/zeromq-4.3.4-he49afe7_1.tar.bz2 + url: https://conda.anaconda.org/conda-forge/osx-64/zeromq-4.3.5-h93d8f39_0.conda hash: - md5: 1972d732b123ed04b60fd21e94f0b178 - sha256: 991e2b42908c5793fe42a78272e6bd5e6412636274500b846991d0f3e5126952 + md5: 4c055e46b394be36681fe476c1e2ee6e + sha256: 19be553b3cc8352b6e842134b8de66ae39fcae80bc575c203076370faab6009c optional: false category: main - build: he49afe7_1 + build: h93d8f39_0 arch: x86_64 subdir: osx-64 - build_number: 1 - license: LGPL-3.0-or-later - license_family: LGPL - size: 320838 - timestamp: 1629967617192 + build_number: 0 + license: MPL-2.0 + size: 294253 + timestamp: 1697057208271 - name: zeromq version: 4.3.4 manager: conda diff --git a/pixi.toml b/pixi.toml index 69b4c653b..1d1fc9b85 100644 --- a/pixi.toml +++ b/pixi.toml @@ -93,7 +93,7 @@ pandera = "*" pip = "*" pre-commit = "*" pyarrow = "*" -pydantic = "~=1.0" +pydantic = "*" pyogrio = "*" pytest = "*" pytest-cov = "*" diff --git a/python/ribasim/pyproject.toml b/python/ribasim/pyproject.toml index aa1e3142b..4449c8c64 100644 --- a/python/ribasim/pyproject.toml +++ b/python/ribasim/pyproject.toml @@ -19,7 +19,7 @@ dependencies = [ "pandas < 2.1", "pandera != 0.16.0", "pyarrow", - "pydantic ~= 1.0", + "pydantic", "pyogrio", "shapely >= 2.0", "tomli", From ec2314633a820de9de292c1c0b5b6532b4318453 Mon Sep 17 00:00:00 2001 From: Martijn Visser Date: Tue, 17 Oct 2023 11:10:13 +0200 Subject: [PATCH 2/7] add default None to Optional node types for pydantic v2 --- python/ribasim/ribasim/model.py | 28 ++++++++++++++-------------- 1 file changed, 14 insertions(+), 14 deletions(-) diff --git a/python/ribasim/ribasim/model.py b/python/ribasim/ribasim/model.py index 2faf0d502..0bb44d24f 100644 --- a/python/ribasim/ribasim/model.py +++ b/python/ribasim/ribasim/model.py @@ -92,22 +92,22 @@ class Model(BaseModel): node: Node edge: Edge basin: Basin - fractional_flow: Optional[FractionalFlow] - level_boundary: Optional[LevelBoundary] - flow_boundary: Optional[FlowBoundary] - linear_resistance: Optional[LinearResistance] - manning_resistance: Optional[ManningResistance] - tabulated_rating_curve: Optional[TabulatedRatingCurve] - pump: Optional[Pump] - outlet: Optional[Outlet] - terminal: Optional[Terminal] - discrete_control: Optional[DiscreteControl] - pid_control: Optional[PidControl] - user: Optional[User] + fractional_flow: Optional[FractionalFlow] = None + level_boundary: Optional[LevelBoundary] = None + flow_boundary: Optional[FlowBoundary] = None + linear_resistance: Optional[LinearResistance] = None + manning_resistance: Optional[ManningResistance] = None + tabulated_rating_curve: Optional[TabulatedRatingCurve] = None + pump: Optional[Pump] = None + outlet: Optional[Outlet] = None + terminal: Optional[Terminal] = None + discrete_control: Optional[DiscreteControl] = None + pid_control: Optional[PidControl] = None + user: Optional[User] = None starttime: datetime.datetime endtime: datetime.datetime - solver: Optional[Solver] - logging: Optional[Logging] + solver: Optional[Solver] = None + logging: Optional[Logging] = None class Config: validate_assignment = True From e2a8e3e769735c7e88c6de13e8e62f9e95232b50 Mon Sep 17 00:00:00 2001 From: Martijn Visser Date: Tue, 17 Oct 2023 11:14:12 +0200 Subject: [PATCH 3/7] run bump-pydantic --- python/ribasim/ribasim/geometry/edge.py | 9 +++------ python/ribasim/ribasim/geometry/node.py | 9 +++------ python/ribasim/ribasim/input_base.py | 5 ++--- python/ribasim/ribasim/model.py | 6 ++---- python/ribasim/ribasim/node_types/pid_control.py | 5 ++--- python/ribasim/ribasim/node_types/user.py | 15 ++++----------- 6 files changed, 16 insertions(+), 33 deletions(-) diff --git a/python/ribasim/ribasim/geometry/edge.py b/python/ribasim/ribasim/geometry/edge.py index d5075d331..5b2501481 100644 --- a/python/ribasim/ribasim/geometry/edge.py +++ b/python/ribasim/ribasim/geometry/edge.py @@ -10,6 +10,7 @@ from numpy.typing import NDArray from pandera.typing import DataFrame, Series from pandera.typing.geopandas import GeoSeries +from pydantic import ConfigDict from ribasim.input_base import TableModel from ribasim.types import FilePath @@ -22,9 +23,7 @@ class StaticSchema(pa.SchemaModel): from_node_id: Series[int] = pa.Field(coerce=True) to_node_id: Series[int] = pa.Field(coerce=True) geometry: GeoSeries[Any] - - class Config: - add_missing_columns = True + model_config = ConfigDict(add_missing_columns=True) class Edge(TableModel): @@ -38,9 +37,7 @@ class Edge(TableModel): """ static: DataFrame[StaticSchema] - - class Config: - validate_assignment = True + model_config = ConfigDict(validate_assignment=True) @classmethod def _layername(cls, field) -> str: diff --git a/python/ribasim/ribasim/geometry/node.py b/python/ribasim/ribasim/geometry/node.py index 37145be82..17f034537 100644 --- a/python/ribasim/ribasim/geometry/node.py +++ b/python/ribasim/ribasim/geometry/node.py @@ -8,6 +8,7 @@ from geopandas import GeoDataFrame from pandera.typing import DataFrame, Series from pandera.typing.geopandas import GeoSeries +from pydantic import ConfigDict from ribasim.input_base import TableModel from ribasim.types import FilePath @@ -19,9 +20,7 @@ class StaticSchema(pa.SchemaModel): name: Series[str] = pa.Field(default="") type: Series[str] geometry: GeoSeries[Any] - - class Config: - add_missing_columns = True + model_config = ConfigDict(add_missing_columns=True) class Node(TableModel): @@ -35,9 +34,7 @@ class Node(TableModel): """ static: DataFrame[StaticSchema] - - class Config: - validate_assignment = True + model_config = ConfigDict(validate_assignment=True) @classmethod def _layername(cls, field) -> str: diff --git a/python/ribasim/ribasim/input_base.py b/python/ribasim/ribasim/input_base.py index 17a5f808c..6aa3ec2fd 100644 --- a/python/ribasim/ribasim/input_base.py +++ b/python/ribasim/ribasim/input_base.py @@ -6,7 +6,7 @@ import pandas as pd from pandas import DataFrame -from pydantic import BaseModel +from pydantic import BaseModel, ConfigDict from ribasim.types import FilePath @@ -31,8 +31,7 @@ def exists(connection: Connection, name: str) -> bool: class TableModel(BaseModel): - class Config: - validate_assignment = True + model_config = ConfigDict(validate_assignment=True) @classmethod def get_input_type(cls): diff --git a/python/ribasim/ribasim/model.py b/python/ribasim/ribasim/model.py index 0bb44d24f..f106cfcdf 100644 --- a/python/ribasim/ribasim/model.py +++ b/python/ribasim/ribasim/model.py @@ -11,7 +11,7 @@ import pandas as pd import tomli import tomli_w -from pydantic import BaseModel +from pydantic import BaseModel, ConfigDict from ribasim import geometry, node_types from ribasim.config import Logging, Solver @@ -108,9 +108,7 @@ class Model(BaseModel): endtime: datetime.datetime solver: Optional[Solver] = None logging: Optional[Logging] = None - - class Config: - validate_assignment = True + model_config = ConfigDict(validate_assignment=True) @classmethod def fields(cls): diff --git a/python/ribasim/ribasim/node_types/pid_control.py b/python/ribasim/ribasim/node_types/pid_control.py index f70dbf3e3..b50a8e3d1 100644 --- a/python/ribasim/ribasim/node_types/pid_control.py +++ b/python/ribasim/ribasim/node_types/pid_control.py @@ -1,6 +1,7 @@ from typing import Optional from pandera.typing import DataFrame +from pydantic import ConfigDict from ribasim.input_base import TableModel from ribasim.schemas import PidControlStaticSchema, PidControlTimeSchema # type: ignore @@ -23,9 +24,7 @@ class PidControl(TableModel): static: Optional[DataFrame[PidControlStaticSchema]] = None time: Optional[DataFrame[PidControlTimeSchema]] = None - - class Config: - validate_assignment = True + model_config = ConfigDict(validate_assignment=True) def sort(self): if self.static is not None: diff --git a/python/ribasim/ribasim/node_types/user.py b/python/ribasim/ribasim/node_types/user.py index 258b8b910..86d8905f3 100644 --- a/python/ribasim/ribasim/node_types/user.py +++ b/python/ribasim/ribasim/node_types/user.py @@ -3,6 +3,7 @@ import pandera as pa from pandera.engines.pandas_engine import PydanticModel from pandera.typing import DataFrame +from pydantic import ConfigDict from ribasim import models from ribasim.input_base import TableModel @@ -11,17 +12,11 @@ class StaticSchema(pa.SchemaModel): - class Config: - """Config with dataframe-level data type.""" - - dtype = PydanticModel(models.UserStatic) + model_config = ConfigDict(dtype=PydanticModel(models.UserStatic)) class TimeSchema(pa.SchemaModel): - class Config: - """Config with dataframe-level data type.""" - - dtype = PydanticModel(models.UserTime) + model_config = ConfigDict(dtype=PydanticModel(models.UserTime)) class User(TableModel): @@ -38,9 +33,7 @@ class User(TableModel): static: Optional[DataFrame[StaticSchema]] = None time: Optional[DataFrame[TimeSchema]] = None - - class Config: - validate_assignment = True + model_config = ConfigDict(validate_assignment=True) def sort(self): if self.static is not None: From 135be978a8192dbd4c499783e4da498af5e435e0 Mon Sep 17 00:00:00 2001 From: Martijn Visser Date: Tue, 17 Oct 2023 11:32:44 +0200 Subject: [PATCH 4/7] update addnode example --- docs/contribute/addnode.qmd | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/contribute/addnode.qmd b/docs/contribute/addnode.qmd index 491743c91..b22e24eef 100644 --- a/docs/contribute/addnode.qmd +++ b/docs/contribute/addnode.qmd @@ -115,6 +115,7 @@ from typing import Optional import pandera as pa from pandera.engines.pandas_engine import PydanticModel from pandera.typing import DataFrame +from pydantic import ConfigDict from ribasim import models from ribasim.input_base import TableModel @@ -145,8 +146,7 @@ class NewNodeType(TableModel): static: Optional[DataFrame[StaticSchema]] = None # possible other schemas - class Config: - validate_assignment = True + model_config = ConfigDict(validate_assignment=True) def sort(self): self.static.sort_values("node_id", ignore_index=True, inplace=True) From d07e9ad157e367af6c4a12744ef5ad2a975c524a Mon Sep 17 00:00:00 2001 From: Martijn Visser Date: Tue, 17 Oct 2023 11:41:11 +0200 Subject: [PATCH 5/7] fix deprecation warning --- python/ribasim/ribasim/input_base.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/python/ribasim/ribasim/input_base.py b/python/ribasim/ribasim/input_base.py index 6aa3ec2fd..dc617726a 100644 --- a/python/ribasim/ribasim/input_base.py +++ b/python/ribasim/ribasim/input_base.py @@ -53,7 +53,7 @@ def get_toml_key(cls): @classmethod def fields(cls): """Return the input fields.""" - return cls.__fields__.keys() + return cls.model_fields.keys() def __repr__(self) -> str: content = [f""] From ce4b3328421322cfdbe856686727276af3a0c456 Mon Sep 17 00:00:00 2001 From: Hofer-Julian <30049909+Hofer-Julian@users.noreply.github.com> Date: Tue, 17 Oct 2023 10:53:11 +0200 Subject: [PATCH 6/7] Add dependency on testmodel for build binary tasks (#672) The testmodels need to be present for the build process to work I've also formatted, so the diff is slightly bigger than expected --- pixi.toml | 19 ++++++++----------- 1 file changed, 8 insertions(+), 11 deletions(-) diff --git a/pixi.toml b/pixi.toml index 1d1fc9b85..1490c1c01 100644 --- a/pixi.toml +++ b/pixi.toml @@ -25,10 +25,7 @@ install-without-pre-commit = { depends_on = [ "install-ribasim-testmodels", "install-quartodoc", ] } -install = { depends_on = [ - "install-without-pre-commit", - "install-pre-commit", -] } +install = { depends_on = ["install-without-pre-commit", "install-pre-commit"] } # Docs instantiate-julia-docs = "julia --project=docs -e \"using Pkg; Pkg.instantiate()\"" build-julia-docs = { cmd = "julia --project=docs docs/make.jl", depends_on = [ @@ -55,8 +52,12 @@ lint = { depends_on = [ "mypy-ribasim-api", ] } # Build -build-ribasim-cli = "cd build/create_binaries && julia --project create_app.jl" -build-libribasim = "cd build/create_binaries && julia --project create_lib.jl" +build-ribasim-cli = { cmd = "cd build/create_binaries && julia --project create_app.jl", depends_on = [ + "generate-testmodels", +] } +build-libribasim = { cmd = "cd build/create_binaries && julia --project create_lib.jl", depends_on = [ + "generate-testmodels", +] } build = { depends_on = ["build-ribasim-cli", "build-libribasim"] } # Test test-ribasim-python = "pytest --numprocesses=auto python/ribasim/tests" @@ -66,11 +67,7 @@ test-ribasim-core = { cmd = "julia --project=core --eval 'using Pkg; Pkg.instant "generate-testmodels", ] } generate-testmodels = "python utils/generate-testmodels.py" -tests = { depends_on = [ - "lint", - "test-ribasim-python", - "test-ribasim-core", -] } +tests = { depends_on = ["lint", "test-ribasim-python", "test-ribasim-core"] } # Codegen generate-schema = "julia --project=docs docs/gen_schema.jl" generate-python = """\ From 50cf27f761ebb2cc77d1bda8993d594826987c4d Mon Sep 17 00:00:00 2001 From: Martijn Visser Date: Tue, 17 Oct 2023 12:13:21 +0200 Subject: [PATCH 7/7] datamodel-codegen pydantic v2 output Mypy doesn't like these dict defaults in config.py, since they are not the same type as the annotated type. Can't we somehow avoid copying the same defaults twice here? --- pixi.toml | 4 +- python/ribasim/ribasim/config.py | 114 ++++++++++--------------------- 2 files changed, 39 insertions(+), 79 deletions(-) diff --git a/pixi.toml b/pixi.toml index 1490c1c01..18e085228 100644 --- a/pixi.toml +++ b/pixi.toml @@ -71,8 +71,8 @@ tests = { depends_on = ["lint", "test-ribasim-python", "test-ribasim-core"] } # Codegen generate-schema = "julia --project=docs docs/gen_schema.jl" generate-python = """\ - datamodel-codegen --use-title-as-name --use-double-quotes --disable-timestamp --use-default --strict-nullable --input-file-type=jsonschema --input docs/schema/root.schema.json --output python/ribasim/ribasim/models.py && \ - datamodel-codegen --use-title-as-name --use-double-quotes --disable-timestamp --use-default --strict-nullable --input-file-type=jsonschema --input docs/schema/Config.schema.json --output python/ribasim/ribasim/config.py""" + datamodel-codegen --use-title-as-name --target-python-version=3.9 --use-double-quotes --disable-timestamp --use-default --strict-nullable --input-file-type=jsonschema --input docs/schema/root.schema.json --output-model-type=pydantic_v2.BaseModel --output python/ribasim/ribasim/models.py && \ + datamodel-codegen --use-title-as-name --target-python-version=3.9 --use-double-quotes --disable-timestamp --use-default --strict-nullable --input-file-type=jsonschema --input docs/schema/Config.schema.json --output-model-type=pydantic_v2.BaseModel --output python/ribasim/ribasim/config.py""" codegen = { depends_on = ["generate-schema", "generate-python", "lint"] } [dependencies] diff --git a/python/ribasim/ribasim/config.py b/python/ribasim/ribasim/config.py index cc12c951d..6dbf5ce44 100644 --- a/python/ribasim/ribasim/config.py +++ b/python/ribasim/ribasim/config.py @@ -6,7 +6,7 @@ from datetime import datetime from typing import List, Optional, Union -from pydantic import BaseModel, Field +from pydantic import BaseModel class Output(BaseModel): @@ -107,79 +107,39 @@ class Config(BaseModel): input_dir: str = "." output_dir: str = "." geopackage: str - output: Output = Field( - default_factory=lambda: Output.parse_obj( - { - "basin": "output/basin.arrow", - "flow": "output/flow.arrow", - "control": "output/control.arrow", - "outstate": None, - "compression": "zstd", - "compression_level": 6, - } - ) - ) - solver: Solver = Field( - default_factory=lambda: Solver.parse_obj( - { - "algorithm": "QNDF", - "saveat": [], - "adaptive": True, - "dt": None, - "dtmin": None, - "dtmax": None, - "force_dtmin": False, - "abstol": 1e-06, - "reltol": 0.001, - "maxiters": 1000000000, - "sparse": True, - "autodiff": True, - } - ) - ) - logging: Logging = Field( - default_factory=lambda: Logging.parse_obj( - {"verbosity": {"level": 0}, "timing": False} - ) - ) - terminal: Terminal = Field( - default_factory=lambda: Terminal.parse_obj({"static": None}) - ) - pid_control: PidControl = Field( - default_factory=lambda: PidControl.parse_obj({"static": None, "time": None}) - ) - level_boundary: LevelBoundary = Field( - default_factory=lambda: LevelBoundary.parse_obj({"static": None, "time": None}) - ) - pump: Pump = Field(default_factory=lambda: Pump.parse_obj({"static": None})) - tabulated_rating_curve: TabulatedRatingCurve = Field( - default_factory=lambda: TabulatedRatingCurve.parse_obj( - {"static": None, "time": None} - ) - ) - user: User = Field( - default_factory=lambda: User.parse_obj({"static": None, "time": None}) - ) - flow_boundary: FlowBoundary = Field( - default_factory=lambda: FlowBoundary.parse_obj({"static": None, "time": None}) - ) - basin: Basin = Field( - default_factory=lambda: Basin.parse_obj( - {"profile": None, "state": None, "static": None, "time": None} - ) - ) - manning_resistance: ManningResistance = Field( - default_factory=lambda: ManningResistance.parse_obj({"static": None}) - ) - discrete_control: DiscreteControl = Field( - default_factory=lambda: DiscreteControl.parse_obj( - {"condition": None, "logic": None} - ) - ) - outlet: Outlet = Field(default_factory=lambda: Outlet.parse_obj({"static": None})) - linear_resistance: LinearResistance = Field( - default_factory=lambda: LinearResistance.parse_obj({"static": None}) - ) - fractional_flow: FractionalFlow = Field( - default_factory=lambda: FractionalFlow.parse_obj({"static": None}) - ) + output: Output = { + "basin": "output/basin.arrow", + "flow": "output/flow.arrow", + "control": "output/control.arrow", + "outstate": None, + "compression": "zstd", + "compression_level": 6, + } + solver: Solver = { + "algorithm": "QNDF", + "saveat": [], + "adaptive": True, + "dt": None, + "dtmin": None, + "dtmax": None, + "force_dtmin": False, + "abstol": 1e-06, + "reltol": 0.001, + "maxiters": 1000000000, + "sparse": True, + "autodiff": True, + } + logging: Logging = {"verbosity": {"level": 0}, "timing": False} + terminal: Terminal = {"static": None} + pid_control: PidControl = {"static": None, "time": None} + level_boundary: LevelBoundary = {"static": None, "time": None} + pump: Pump = {"static": None} + tabulated_rating_curve: TabulatedRatingCurve = {"static": None, "time": None} + user: User = {"static": None, "time": None} + flow_boundary: FlowBoundary = {"static": None, "time": None} + basin: Basin = {"profile": None, "state": None, "static": None, "time": None} + manning_resistance: ManningResistance = {"static": None} + discrete_control: DiscreteControl = {"condition": None, "logic": None} + outlet: Outlet = {"static": None} + linear_resistance: LinearResistance = {"static": None} + fractional_flow: FractionalFlow = {"static": None}