From 5c3b8de44e0f41aeb6380d44d4fcb4bb01b516b8 Mon Sep 17 00:00:00 2001
From: Marcel Zwiers <mpzwiers@gmail.com>
Date: Thu, 11 Jan 2024 17:51:02 +0100
Subject: [PATCH] Also collect json-files for physio conversions

---
 bidscoin/plugins/dcm2niix2bids.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/bidscoin/plugins/dcm2niix2bids.py b/bidscoin/plugins/dcm2niix2bids.py
index 098fcb9d..18c56db2 100644
--- a/bidscoin/plugins/dcm2niix2bids.py
+++ b/bidscoin/plugins/dcm2niix2bids.py
@@ -293,6 +293,7 @@ def bidscoiner_plugin(session: Path, bidsmap: dict, bidsses: Path) -> Union[None
             try:
                 physiodata = physio.readphysio(sourcefile)
                 physio.physio2tsv(physiodata, outfolder/bidsname)
+                jsonfiles.update(outfolder.glob(f"{bidsname}.json"))  # add existing created json files: bidsname.json
             except Exception as physioerror:
                 LOGGER.error(f"Could not read/convert physiological file: {sourcefile}\n{physioerror}")
                 continue