Send the sequence_accession, not a Run object

EBI-Metagenomics · Feb 16, 2024 · c3ba441 · c3ba441
1 parent afa3f18
commit c3ba441
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/emgapi/management/commands/populate_metagenomics_exchange.py b/emgapi/management/commands/populate_metagenomics_exchange.py
@@ -129,13 +129,13 @@ def process_to_index_and_update_records(self, analyses_to_index_and_update):
 
                     response = self.mgx_api.add_analysis(
                         mgya=annotation_job.accession,
-                        sequence_accession=annotation_job.run,
+                        sequence_accession=sequence_accession,
                     )
                     if response.ok:
                         logging.info(f"Successfully added {annotation_job}")
                         registry_id, metadata_match = self.mgx_api.check_analysis(
                             mgya=annotation_job.accession,
-                            sequence_id=annotation_job.run,
+                            sequence_id=sequence_accession,
                         )
                         annotation_job.mgx_accession = registry_id
                         annotation_job.last_mgx_indexed = timezone.now() + timedelta(