Predefined EMMO namespace with checking and label lookup #1112
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| name: CI - Tests | |
| on: | |
| pull_request: | |
| push: | |
| branches: | |
| - 'master' | |
| - 'push-action/**' # Allow pushing to protected branches (using CasperWA/push-protected) | |
| jobs: | |
| basic-tests: | |
| name: External | |
| uses: SINTEF/ci-cd/.github/workflows/[email protected] | |
| with: | |
| ## General settings: | |
| install_extras: "[dev]" | |
| ## pre-commit | |
| run_pre-commit: false | |
| ## pylint & safety | |
| python_version_pylint_safety: "3.9" | |
| # pylint-specific settings | |
| run_pylint: true | |
| pylint_runs: | | |
| --rcfile=pyproject.toml tripper | |
| --rcfile=pyproject.toml --disable=import-outside-toplevel,redefined-outer-name tests | |
| # safety-specific settings | |
| run_safety: true | |
| # 48547: RDFLib vulnerability: https://pyup.io/vulnerabilities/PVE-2022-48547/48547/ | |
| # 44715-44717: NumPy vulnerabilities: | |
| # https://pyup.io/vulnerabilities/CVE-2021-41495/44715/ | |
| # https://pyup.io/vulnerabilities/CVE-2021-41496/44716/ | |
| # https://pyup.io/vulnerabilities/CVE-2021-34141/44717/ | |
| # 70612: Jinja2 vulnerability. Only used as subdependency for mkdocs++ in tripper. | |
| # https://data.safetycli.com/v/70612/97c/ | |
| # https://data.safetycli.com/v/72715/97c/ # update to mkdocs>=9.5.32 | |
| safety_options: | | |
| --ignore=48547 | |
| --ignore=44715 | |
| --ignore=44716 | |
| --ignore=44717 | |
| --ignore=70612 | |
| --ignore=72715 | |
| ## Build package | |
| run_build_package: true | |
| python_version_package: "3.9" | |
| build_libs: flit | |
| build_cmd: flit build | |
| ## Build documentation | |
| run_build_docs: true | |
| python_version_docs: "3.9" | |
| warnings_as_errors: true | |
| use_mkdocs: true | |
| # mkdocs-specific settings | |
| update_python_api_ref: true | |
| update_docs_landing_page: true | |
| package_dirs: tripper | |
| pytest: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.7", "3.8", "3.9", "3.10", "3.11", "3.12"] | |
| steps: | |
| - name: Checkout tripper | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| sudo apt install graphviz | |
| python -m pip install -U pip | |
| pip install -U setuptools wheel flit | |
| pip install -e .[testing] | |
| - name: List installed packages | |
| run: pip freeze | |
| - name: Test with pytest | |
| run: pytest -vvv --cov-report=xml --doctest-modules | |
| - name: Upload coverage to Codecov | |
| if: matrix.python-version == '3.9' && github.repository == 'EMMC-ASBL/tripper' | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| - name: Run doctest on tutorial | |
| run: python -m doctest docs/tutorial.md | |
| pytest-no-extra-dependencies: # Test for basic version, without extras installed | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.7", "3.8", "3.9", "3.10", "3.11", "3.12"] | |
| steps: | |
| - name: Checkout tripper | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| sudo apt install graphviz | |
| python -m pip install -U pip | |
| pip install -U setuptools wheel flit | |
| pip install -e .[testing-core] | |
| - name: Test with pytest, but without other extra dependencies | |
| run: pytest -vvv tests/ |