nmRanalysis

Set up

Optional: If you do not already have it, install Git Bash for Windows
If you don't have docker installed, the easiest way is to install docker for desktop
Open a bash terminal and clone into the LOCAL branch of the nmRanalysis repository by copying the HTTPS link available in the dropdown menu of the green 'Code' button.
```
git clone -b local https://github.com/EMSL-Computing/nmRanalysis.git
```
Navigate to the nmRanalysis directory with cd nmRanalysis
Build images with the following command
```
docker-compose up --build
```
** Note: The build will take ~30 minutes the very first time. ** Subsequent updates where only nmRanalysis and not its dependencies are loaded should take only a couple of minutes.

Once the image is built and the container is running you should get the terminal message: "Listening on http://0.0.0.0:3838"
Open a web browser and go to "localhost:3838"
You are now free to do your analyses through the app!

If you have trouble with installing dependencies through renv. You might need to change the CRAN respository.

Open the Dockerfile in a text editor
Change line 31 from RUN R -e "install.packages('remotes', repos = c(CRAN = 'http://cran.us.r-project.org'), dependencies = TRUE)" to RUN R -e "install.packages('remotes', repos = c(CRAN = 'http://cran.rstudio.com/'), dependencies = TRUE)"
Save the Dockerfile changes and re-run the build command.