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15 Open 47 Closed
15 Open 47 Closed
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Issues list

Sequencer values documentation Improvements or additions to documentation enhancement New feature or request
#158 opened Jul 25, 2024 by jodyphelan
1
col names in dada2.clusters.txt enhancement New feature or request
#149 opened Jun 11, 2024 by andres-ad
2
misspelling demultiplexed in work folder bug Something isn't working
#148 opened Jun 5, 2024 by andres-ad
Look for potential optimizations during trimAndFilter + PhiX removal
#117 opened Sep 28, 2023 by bgpalmer
Make sure alignments work for all reference file fastas
#107 opened Jul 31, 2023 by bgpalmer
Add SNP coordinates to resmarker output
#96 opened Jul 7, 2023 by andres-ad
2
long amplicons
#94 opened Jul 7, 2023 by andres-ad
1
vcf
#90 opened Jul 5, 2023 by andres-ad
SNPs that show in more than 1 amplicon
#88 opened Jul 5, 2023 by andres-ad
1
Non-pf sequences
#86 opened Jul 5, 2023 by andres-ad
1
Non overlapping truncation length
#85 opened Jul 5, 2023 by andres-ad
1
Insertions and deletions in resmarkers
#84 opened Jul 5, 2023 by andres-ad
Add run summary with parameters to published output deferred enhancement New feature or request
#37 opened Oct 1, 2022 by ghost
Update conda environment with R dependencies deferred enhancement New feature or request
#34 opened Sep 22, 2022 by ghost
amplicon names in fasta files deferred enhancement New feature or request
#28 opened Sep 21, 2022 by aarandad
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