dev-requirements.txt

# This file was autogenerated by uv via the following command:
#    uv pip compile --universal -p 3.11 --extra=dev --extra=docs --output-file=dev-requirements.txt pyproject.toml
anyio==4.6.2.post1
    # via
    #   httpx
    #   jupyter-server
anytree==2.12.1
    # via pynxtools
appnope==0.1.4 ; platform_system == 'Darwin'
    # via ipykernel
argon2-cffi==23.1.0
    # via jupyter-server
argon2-cffi-bindings==21.2.0
    # via argon2-cffi
arrow==1.3.0
    # via isoduration
ase==3.23.0
    # via
    #   ifes-apt-tc-data-modeling
    #   pynxtools
asttokens==2.4.1
    # via stack-data
async-lru==2.0.4
    # via jupyterlab
attrs==24.2.0
    # via
    #   jsonschema
    #   referencing
babel==2.16.0
    # via
    #   jupyterlab-server
    #   mkdocs-material
beautifulsoup4==4.12.3
    # via nbconvert
bleach==6.1.0
    # via nbconvert
blosc2==2.7.1
    # via tables
build==1.2.2.post1
    # via pip-tools
certifi==2024.8.30
    # via
    #   httpcore
    #   httpx
    #   requests
cffi==1.17.1
    # via
    #   argon2-cffi-bindings
    #   pyzmq
cfgv==3.4.0
    # via pre-commit
charset-normalizer==3.4.0
    # via requests
click==8.1.7
    # via
    #   click-default-group
    #   mkdocs
    #   mkdocs-click
    #   pip-tools
    #   pynxtools
click-default-group==1.2.4
    # via pynxtools
colorama==0.4.6
    # via
    #   build
    #   click
    #   ipython
    #   mkdocs
    #   mkdocs-material
    #   pytest
comm==0.2.2
    # via
    #   ipykernel
    #   ipywidgets
contourpy==1.3.0
    # via matplotlib
coverage==7.6.4
    # via pytest-cov
cycler==0.12.1
    # via matplotlib
debugpy==1.8.7
    # via ipykernel
decorator==5.1.1
    # via ipython
defusedxml==0.7.1
    # via nbconvert
distlib==0.3.9
    # via virtualenv
executing==2.1.0
    # via stack-data
fastjsonschema==2.20.0
    # via nbformat
filelock==3.16.1
    # via virtualenv
flatdict==4.0.1
    # via ifes-apt-tc-data-modeling
fonttools==4.54.1
    # via matplotlib
fqdn==1.5.1
    # via jsonschema
ghp-import==2.1.0
    # via mkdocs
h11==0.14.0
    # via httpcore
h5grove==2.3.0
    # via jupyterlab-h5web
h5py==3.12.1
    # via
    #   h5grove
    #   ifes-apt-tc-data-modeling
    #   jupyterlab-h5web
    #   pynxtools
hjson==3.1.0
    # via
    #   mkdocs-macros-plugin
    #   super-collections
httpcore==1.0.6
    # via httpx
httpx==0.27.2
    # via jupyterlab
identify==2.6.1
    # via pre-commit
idna==3.10
    # via
    #   anyio
    #   httpx
    #   jsonschema
    #   requests
ifes-apt-tc-data-modeling==0.2.2
    # via pynxtools-apm (pyproject.toml)
importlib-metadata==8.5.0
    # via pynxtools
iniconfig==2.0.0
    # via pytest
ipykernel==6.29.5
    # via
    #   jupyter
    #   jupyter-console
    #   jupyterlab
ipython==8.28.0
    # via
    #   ipykernel
    #   ipywidgets
    #   jupyter-console
ipywidgets==8.1.5
    # via jupyter
isoduration==20.11.0
    # via jsonschema
jedi==0.19.1
    # via ipython
jinja2==3.1.4
    # via
    #   jupyter-server
    #   jupyterlab
    #   jupyterlab-server
    #   mkdocs
    #   mkdocs-macros-plugin
    #   mkdocs-material
    #   nbconvert
json5==0.9.25
    # via jupyterlab-server
jsonpointer==3.0.0
    # via jsonschema
jsonschema==4.23.0
    # via
    #   jupyter-events
    #   jupyterlab-server
    #   nbformat
jsonschema-specifications==2024.10.1
    # via jsonschema
jupyter==1.1.1
    # via
    #   pynxtools-apm (pyproject.toml)
    #   ifes-apt-tc-data-modeling
jupyter-client==8.6.3
    # via
    #   ipykernel
    #   jupyter-console
    #   jupyter-server
    #   nbclient
jupyter-console==6.6.3
    # via jupyter
jupyter-core==5.7.2
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-console
    #   jupyter-server
    #   jupyterlab
    #   nbclient
    #   nbconvert
    #   nbformat
jupyter-events==0.10.0
    # via jupyter-server
jupyter-lsp==2.2.5
    # via jupyterlab
jupyter-server==2.14.2
    # via
    #   jupyter-lsp
    #   jupyterlab
    #   jupyterlab-h5web
    #   jupyterlab-server
    #   notebook
    #   notebook-shim
jupyter-server-terminals==0.5.3
    # via jupyter-server
jupyterlab==4.2.5
    # via
    #   pynxtools-apm (pyproject.toml)
    #   ifes-apt-tc-data-modeling
    #   jupyter
    #   notebook
jupyterlab-h5web==12.3.0
    # via
    #   pynxtools-apm (pyproject.toml)
    #   ifes-apt-tc-data-modeling
jupyterlab-pygments==0.3.0
    # via nbconvert
jupyterlab-server==2.27.3
    # via
    #   jupyterlab
    #   notebook
jupyterlab-widgets==3.0.13
    # via ipywidgets
kiwisolver==1.4.7
    # via matplotlib
lxml==5.3.0
    # via pynxtools
markdown==3.7
    # via
    #   markdown-include
    #   mkdocs
    #   mkdocs-click
    #   mkdocs-material
    #   pymdown-extensions
markdown-include==0.8.1
    # via pynxtools-apm (pyproject.toml)
markupsafe==3.0.2
    # via
    #   jinja2
    #   mkdocs
    #   nbconvert
matplotlib==3.9.2
    # via
    #   ase
    #   radioactivedecay
matplotlib-inline==0.1.7
    # via
    #   ipykernel
    #   ipython
mergedeep==1.3.4
    # via
    #   mkdocs
    #   mkdocs-get-deps
    #   pynxtools
mistune==3.0.2
    # via nbconvert
mkdocs==1.6.1
    # via
    #   pynxtools-apm (pyproject.toml)
    #   mkdocs-macros-plugin
    #   mkdocs-material
mkdocs-click==0.8.1
    # via pynxtools-apm (pyproject.toml)
mkdocs-get-deps==0.2.0
    # via mkdocs
mkdocs-macros-plugin==1.3.6
    # via pynxtools-apm (pyproject.toml)
mkdocs-material==9.5.42
    # via pynxtools-apm (pyproject.toml)
mkdocs-material-extensions==1.3.1
    # via
    #   pynxtools-apm (pyproject.toml)
    #   mkdocs-material
mpmath==1.3.0
    # via sympy
msgpack==1.1.0
    # via blosc2
mypy==1.12.1
    # via pynxtools-apm (pyproject.toml)
mypy-extensions==1.0.0
    # via mypy
nbclient==0.10.0
    # via nbconvert
nbconvert==7.16.4
    # via
    #   jupyter
    #   jupyter-server
nbformat==5.10.4
    # via
    #   jupyter-server
    #   nbclient
    #   nbconvert
ndindex==1.9.2
    # via blosc2
nest-asyncio==1.6.0
    # via ipykernel
networkx==3.4.2
    # via radioactivedecay
nodeenv==1.9.1
    # via pre-commit
notebook==7.2.2
    # via jupyter
notebook-shim==0.2.4
    # via
    #   jupyterlab
    #   notebook
numexpr==2.10.1
    # via
    #   blosc2
    #   tables
numpy==1.26.4
    # via
    #   pynxtools-apm (pyproject.toml)
    #   ase
    #   blosc2
    #   contourpy
    #   h5grove
    #   h5py
    #   ifes-apt-tc-data-modeling
    #   matplotlib
    #   numexpr
    #   pandas
    #   pynxtools
    #   radioactivedecay
    #   scipy
    #   tables
    #   tifffile
    #   xarray
orjson==3.10.9
    # via h5grove
overrides==7.7.0
    # via jupyter-server
packaging==24.1
    # via
    #   build
    #   ipykernel
    #   jupyter-server
    #   jupyterlab
    #   jupyterlab-server
    #   matplotlib
    #   mkdocs
    #   mkdocs-macros-plugin
    #   nbconvert
    #   pint
    #   pytest
    #   tables
    #   xarray
paginate==0.5.7
    # via mkdocs-material
pandas==2.2.3
    # via
    #   ifes-apt-tc-data-modeling
    #   pynxtools
    #   radioactivedecay
    #   xarray
pandocfilters==1.5.1
    # via nbconvert
parso==0.8.4
    # via jedi
pathspec==0.12.1
    # via
    #   mkdocs
    #   mkdocs-macros-plugin
pexpect==4.9.0 ; sys_platform != 'emscripten' and sys_platform != 'win32'
    # via ipython
pillow==11.0.0
    # via matplotlib
pint==0.17
    # via pynxtools-apm (pyproject.toml)
pip==24.2
    # via pip-tools
pip-tools==7.4.1
    # via pynxtools-apm (pyproject.toml)
platformdirs==4.3.6
    # via
    #   jupyter-core
    #   mkdocs-get-deps
    #   virtualenv
pluggy==1.5.0
    # via pytest
pre-commit==4.0.1
    # via pynxtools-apm (pyproject.toml)
prometheus-client==0.21.0
    # via jupyter-server
prompt-toolkit==3.0.48
    # via
    #   ipython
    #   jupyter-console
psutil==6.1.0
    # via ipykernel
ptyprocess==0.7.0 ; os_name != 'nt' or (sys_platform != 'emscripten' and sys_platform != 'win32')
    # via
    #   pexpect
    #   terminado
pure-eval==0.2.3
    # via stack-data
py-cpuinfo==9.0.0
    # via
    #   blosc2
    #   tables
pycparser==2.22
    # via cffi
pygments==2.18.0
    # via
    #   ipython
    #   jupyter-console
    #   mkdocs-material
    #   nbconvert
pymdown-extensions==10.11.2
    # via mkdocs-material
pynxtools==0.9.0
    # via pynxtools-apm (pyproject.toml)
pyparsing==3.2.0
    # via matplotlib
pyproject-hooks==1.2.0
    # via
    #   build
    #   pip-tools
pytest==8.3.3
    # via
    #   pynxtools-apm (pyproject.toml)
    #   pytest-cov
    #   pytest-timeout
pytest-cov==5.0.0
    # via pynxtools-apm (pyproject.toml)
pytest-timeout==2.3.1
    # via pynxtools-apm (pyproject.toml)
python-dateutil==2.9.0.post0
    # via
    #   arrow
    #   ghp-import
    #   jupyter-client
    #   matplotlib
    #   mkdocs-macros-plugin
    #   pandas
python-json-logger==2.0.7
    # via jupyter-events
pytz==2024.2
    # via pandas
pywin32==308 ; platform_python_implementation != 'PyPy' and sys_platform == 'win32'
    # via jupyter-core
pywinpty==2.0.14 ; os_name == 'nt'
    # via
    #   jupyter-server
    #   jupyter-server-terminals
    #   terminado
pyyaml==6.0.2
    # via
    #   jupyter-events
    #   mkdocs
    #   mkdocs-get-deps
    #   mkdocs-macros-plugin
    #   pre-commit
    #   pymdown-extensions
    #   pynxtools
    #   pyyaml-env-tag
pyyaml-env-tag==0.1
    # via mkdocs
pyzmq==26.2.0
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-console
    #   jupyter-server
radioactivedecay==0.5.1
    # via ifes-apt-tc-data-modeling
referencing==0.35.1
    # via
    #   jsonschema
    #   jsonschema-specifications
    #   jupyter-events
regex==2024.9.11
    # via mkdocs-material
requests==2.32.3
    # via
    #   jupyterlab-server
    #   mkdocs-material
rfc3339-validator==0.1.4
    # via
    #   jsonschema
    #   jupyter-events
rfc3986-validator==0.1.1
    # via
    #   jsonschema
    #   jupyter-events
rpds-py==0.20.0
    # via
    #   jsonschema
    #   referencing
ruff==0.8.0
    # via pynxtools-apm (pyproject.toml)
scipy==1.14.1
    # via
    #   ase
    #   radioactivedecay
send2trash==1.8.3
    # via jupyter-server
setuptools==75.2.0
    # via
    #   jupyterlab
    #   pip-tools
    #   radioactivedecay
six==1.16.0
    # via
    #   anytree
    #   asttokens
    #   bleach
    #   python-dateutil
    #   rfc3339-validator
sniffio==1.3.1
    # via
    #   anyio
    #   httpx
soupsieve==2.6
    # via beautifulsoup4
stack-data==0.6.3
    # via ipython
structlog==24.4.0
    # via pynxtools-apm (pyproject.toml)
super-collections==0.5.3
    # via mkdocs-macros-plugin
sympy==1.13.3
    # via radioactivedecay
tables==3.10.1
    # via ifes-apt-tc-data-modeling
termcolor==2.5.0
    # via mkdocs-macros-plugin
terminado==0.18.1
    # via
    #   jupyter-server
    #   jupyter-server-terminals
tifffile==2024.9.20
    # via h5grove
tinycss2==1.3.0
    # via nbconvert
tomli==2.0.2 ; python_full_version == '3.11'
    # via coverage
tornado==6.4.1
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-server
    #   jupyterlab
    #   notebook
    #   terminado
traitlets==5.14.3
    # via
    #   comm
    #   ipykernel
    #   ipython
    #   ipywidgets
    #   jupyter-client
    #   jupyter-console
    #   jupyter-core
    #   jupyter-events
    #   jupyter-server
    #   jupyterlab
    #   matplotlib-inline
    #   nbclient
    #   nbconvert
    #   nbformat
types-python-dateutil==2.9.0.20241003
    # via arrow
types-pytz==2024.2.0.20241003
    # via pynxtools-apm (pyproject.toml)
types-pyyaml==6.0.12.20240917
    # via pynxtools-apm (pyproject.toml)
types-requests==2.32.0.20241016
    # via pynxtools-apm (pyproject.toml)
typing-extensions==4.12.2
    # via
    #   h5grove
    #   ipython
    #   mypy
    #   tables
tzdata==2024.2
    # via pandas
uri-template==1.3.0
    # via jsonschema
urllib3==2.2.3
    # via
    #   requests
    #   types-requests
uv==0.4.25
    # via pynxtools-apm (pyproject.toml)
virtualenv==20.27.0
    # via pre-commit
watchdog==5.0.3
    # via mkdocs
wcwidth==0.2.13
    # via prompt-toolkit
webcolors==24.8.0
    # via jsonschema
webencodings==0.5.1
    # via
    #   bleach
    #   tinycss2
websocket-client==1.8.0
    # via jupyter-server
wheel==0.44.0
    # via pip-tools
widgetsnbextension==4.0.13
    # via ipywidgets
xarray==2024.9.0
    # via pynxtools
xmltodict==0.14.2
    # via ifes-apt-tc-data-modeling
zipp==3.20.2
    # via importlib-metadata