diff --git a/404.html b/404.html index 7dacc7a..ea4fb6b 100644 --- a/404.html +++ b/404.html @@ -45,7 +45,14 @@ Changelog - + diff --git a/authors.html b/authors.html index 114b7c5..a8c6c3c 100644 --- a/authors.html +++ b/authors.html @@ -28,7 +28,13 @@
  • Changelog
    • - + @@ -54,7 +60,7 @@

    Authors

    Citation

    - + Source: inst/CITATION
    diff --git a/index.html b/index.html index ea659ce..dff4f3d 100644 --- a/index.html +++ b/index.html @@ -53,7 +53,14 @@ Changelog - + @@ -224,6 +231,8 @@

    SourcesLinks

    diff --git a/news/index.html b/news/index.html index af65ca5..57537dc 100644 --- a/news/index.html +++ b/news/index.html @@ -28,7 +28,13 @@
  • Changelog
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    Changelog

    - + Source: NEWS.md
    @@ -88,11 +94,11 @@

    version 1.0.6

    version 1.0.5

    -

    version 1.0.4

    -

    version 1.0.3

    @@ -104,7 +110,7 @@

    version 1.0.2

    version 1.0.1

    -

    version 1.0.

    diff --git a/pkgdown.yml b/pkgdown.yml index 0c2a3ff..141bf97 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -2,7 +2,7 @@ pandoc: 2.19.2 pkgdown: 2.0.7 pkgdown_sha: ~ articles: {} -last_built: 2023-10-30T08:21Z +last_built: 2024-01-28T09:33Z urls: reference: https://fbartos.github.io/zcurve/reference article: https://fbartos.github.io/zcurve/articles diff --git a/reference/OSC.z.html b/reference/OSC.z.html index 1bf22cd..271ba37 100644 --- a/reference/OSC.z.html +++ b/reference/OSC.z.html @@ -36,7 +36,13 @@
  • Changelog
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    +
    @@ -47,7 +53,7 @@

    Z-scores from subset of original studies featured in OSC 2015 reproducibility project

    - + Source: R/main.R
    diff --git a/reference/control_EM.html b/reference/control_EM.html index 253495f..d302c09 100644 --- a/reference/control_EM.html +++ b/reference/control_EM.html @@ -32,7 +32,13 @@
  • Changelog
    • - + @@ -42,7 +48,7 @@

    Control settings for the zcurve EM algorithm

    - + Source: R/zcurve_EM.R
    diff --git a/reference/control_density.html b/reference/control_density.html index 3662c0f..153b894 100644 --- a/reference/control_density.html +++ b/reference/control_density.html @@ -35,7 +35,13 @@
  • Changelog
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    + @@ -45,7 +51,7 @@

    Control settings for the z-curve 2.0 density algorithm

    - + Source: R/zcurve_density.R
    diff --git a/reference/control_density_v1.html b/reference/control_density_v1.html index dffc39c..463f9e3 100644 --- a/reference/control_density_v1.html +++ b/reference/control_density_v1.html @@ -33,7 +33,13 @@
  • Changelog
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    + @@ -43,7 +49,7 @@

    Control settings for the original z-curve density algorithm

    - + Source: R/zcurve_density.R
    diff --git a/reference/head.zcurve_data.html b/reference/head.zcurve_data.html index 317d4ec..c0f650b 100644 --- a/reference/head.zcurve_data.html +++ b/reference/head.zcurve_data.html @@ -28,7 +28,13 @@
  • Changelog
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    + @@ -38,7 +44,7 @@

    Prints first few rows of a z-curve data object

    - + Source: R/data-preparation.R
    diff --git a/reference/index.html b/reference/index.html index c88d217..e7b3344 100644 --- a/reference/index.html +++ b/reference/index.html @@ -28,7 +28,13 @@
  • Changelog
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    + diff --git a/reference/is.zcurve.html b/reference/is.zcurve.html index 35eae2c..94025a4 100644 --- a/reference/is.zcurve.html +++ b/reference/is.zcurve.html @@ -28,7 +28,13 @@
  • Changelog
    • - + @@ -38,7 +44,7 @@

    Reports whether x is a zcurve object

    - + Source: R/tools.R
    diff --git a/reference/plot.zcurve.html b/reference/plot.zcurve.html index c0a8007..105a906 100644 --- a/reference/plot.zcurve.html +++ b/reference/plot.zcurve.html @@ -28,7 +28,13 @@
  • Changelog
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    + @@ -38,7 +44,7 @@

    Plot fitted z-curve object

    - + Source: R/main.R
    diff --git a/reference/power_to_z.html b/reference/power_to_z.html index 40bcc09..3a91f57 100644 --- a/reference/power_to_z.html +++ b/reference/power_to_z.html @@ -30,7 +30,13 @@
  • Changelog
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    + @@ -40,7 +46,7 @@

    Compute z-score corresponding to a power

    - + Source: R/tools.R
    diff --git a/reference/print.estimates.zcurve.html b/reference/print.estimates.zcurve.html index 3f7b85e..97b967d 100644 --- a/reference/print.estimates.zcurve.html +++ b/reference/print.estimates.zcurve.html @@ -28,7 +28,13 @@
  • Changelog
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    + @@ -38,7 +44,7 @@

    Prints estimates from z-curve object

    - + Source: R/tools.R
    diff --git a/reference/print.summary.zcurve.html b/reference/print.summary.zcurve.html index 6a500bc..569c6e2 100644 --- a/reference/print.summary.zcurve.html +++ b/reference/print.summary.zcurve.html @@ -28,7 +28,13 @@
  • Changelog
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    + @@ -38,7 +44,7 @@

    Prints summary object for z-curve method

    - + Source: R/main.R
    diff --git a/reference/print.zcurve.html b/reference/print.zcurve.html index b6b2a7a..08c8cd7 100644 --- a/reference/print.zcurve.html +++ b/reference/print.zcurve.html @@ -28,7 +28,13 @@
  • Changelog
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    + @@ -38,7 +44,7 @@

    Prints a fitted z-curve object

    - + Source: R/main.R
    diff --git a/reference/print.zcurve_data.html b/reference/print.zcurve_data.html index 8223cc9..c5d0716 100644 --- a/reference/print.zcurve_data.html +++ b/reference/print.zcurve_data.html @@ -28,7 +28,13 @@
  • Changelog
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    + @@ -38,7 +44,7 @@

    Prints a z-curve data object

    - + Source: R/data-preparation.R
    diff --git a/reference/summary.zcurve.html b/reference/summary.zcurve.html index cd5b684..643b6ac 100644 --- a/reference/summary.zcurve.html +++ b/reference/summary.zcurve.html @@ -28,7 +28,13 @@
  • Changelog
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    + @@ -38,7 +44,7 @@

    Summarize fitted z-curve object

    - + Source: R/main.R
    diff --git a/reference/z_to_power.html b/reference/z_to_power.html index a2ae8ad..a5f0ce0 100644 --- a/reference/z_to_power.html +++ b/reference/z_to_power.html @@ -30,7 +30,13 @@
  • Changelog
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    + @@ -40,7 +46,7 @@

    Compute power corresponding to z-scores

    - + Source: R/tools.R
    diff --git a/reference/zcurve-1.png b/reference/zcurve-1.png index 3439591..c026e90 100644 Binary files a/reference/zcurve-1.png and b/reference/zcurve-1.png differ diff --git a/reference/zcurve-package.html b/reference/zcurve-package.html index 73d9b7a..4ad64a9 100644 --- a/reference/zcurve-package.html +++ b/reference/zcurve-package.html @@ -30,7 +30,13 @@
  • Changelog
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    + @@ -40,7 +46,7 @@

    zcurve: An Implementation of Z-Curves

    - + Source: R/zcurve-package.R
    diff --git a/reference/zcurve.estimates.html b/reference/zcurve.estimates.html index a4500ee..6f37c55 100644 --- a/reference/zcurve.estimates.html +++ b/reference/zcurve.estimates.html @@ -29,7 +29,13 @@
  • Changelog
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    z-curve estimates

    - + Source: R/tools.R
    diff --git a/reference/zcurve.html b/reference/zcurve.html index 257f4c7..479904b 100644 --- a/reference/zcurve.html +++ b/reference/zcurve.html @@ -33,7 +33,13 @@
  • Changelog
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    Fit a z-curve

    - + Source: R/main.R
    @@ -191,12 +197,12 @@

    Examples

    #> model: EM via EM #> #> Estimate l.CI u.CI -#> ERR 0.615 0.449 0.748 -#> EDR 0.389 0.073 0.695 +#> ERR 0.615 0.455 0.748 +#> EDR 0.383 0.075 0.698 #> -#> Model converged in 58 + 141 iterations +#> Model converged in 28 + 195 iterations #> Fitted using 73 z-values. 90 supplied, 85 significant (ODR = 0.94, 95% CI [0.87, 0.98]). -#> Q = -60.61, 95% CI[-70.67, -46.06] +#> Q = -60.61, 95% CI[-72.01, -47.30] summary(m.D) #> Call: #> zcurve(z = OSC.z, method = "density", bootstrap = FALSE) diff --git a/reference/zcurve_clustered.html b/reference/zcurve_clustered.html index 06098a2..2ef94ac 100644 --- a/reference/zcurve_clustered.html +++ b/reference/zcurve_clustered.html @@ -35,7 +35,13 @@
  • Changelog
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    Fit a z-curve to clustered data

    - + Source: R/zcurve_clustered.R
    diff --git a/reference/zcurve_data.html b/reference/zcurve_data.html index 09fb853..b3aee4b 100644 --- a/reference/zcurve_data.html +++ b/reference/zcurve_data.html @@ -33,7 +33,13 @@
  • Changelog
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    + @@ -43,7 +49,7 @@

    Prepare data for z-curve

    - + Source: R/data-preparation.R
    diff --git a/reference/zcurve_options.html b/reference/zcurve_options.html index a05983d..40dd77e 100644 --- a/reference/zcurve_options.html +++ b/reference/zcurve_options.html @@ -29,7 +29,13 @@
  • Changelog
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    + @@ -39,7 +45,7 @@

    Options for the zcurve package

    - + Source: R/utilities.R