From 27195565c3113bf7bbd597947e7fff7d3ae3a06d Mon Sep 17 00:00:00 2001 From: Yojana Gadiya <45199062+YojanaGadiya@users.noreply.github.com> Date: Thu, 10 Oct 2024 11:58:19 +0200 Subject: [PATCH] update figure names an main --- Main.py | 4 ++-- README.md | 15 ++------------- .../{Antimicrobial.webp => antimicrobial.webp} | Bin images/{kg_1.PNG => kg_1.png} | Bin images/{kg_2.PNG => kg_2.png} | Bin 5 files changed, 4 insertions(+), 15 deletions(-) rename images/{Antimicrobial.webp => antimicrobial.webp} (100%) rename images/{kg_1.PNG => kg_1.png} (100%) rename images/{kg_2.PNG => kg_2.png} (100%) diff --git a/Main.py b/Main.py index 1437b36..202c09e 100644 --- a/Main.py +++ b/Main.py @@ -180,7 +180,7 @@ def load_logo(filepath): hasClicked = card( title="AntiMicrobial KG", text="Data warehouse of experimentally validated antibacterial chemicals", - image=load_logo("images/Antimicrobial.webp"), + image=load_logo("images/antimicrobial.webp"), url="https://antimicrobial-kg.serve.scilifelab.se/", ) @@ -193,7 +193,7 @@ def load_logo(filepath): hasClicked = card( title="AntiMicrobial Model", text="Model for predicting antimicorbial activity of small molecules", - image=load_logo("images/Antimicrobial.webp"), + image=load_logo("images/antimicrobial.webp"), url="https://antimicrobial-kg.serve.scilifelab.se/Model_Prediction", ) diff --git a/README.md b/README.md index 5e6c929..85e9d3c 100644 --- a/README.md +++ b/README.md @@ -1,15 +1,4 @@ -# streamlit_ITMP -attempts to build streamlit apps for different usage. +# DataScience Toolkit -## Pareto front -This app allows to upload screening results, to generate a hit Pareto front according to unweighted choice of numerical columns, display of the screening results on first two columns used for Pareto front calculation, mouse on scatter plot generation via Bokeh and download possibility of same input excel with extra column with labels of Pareto front chosen. Needs extra content like clearer trend towards positive control (maximize) or negative control (minimize). - -Possible discretization of columns with quantiles (e.g. instead of max or min only use 4th quartile (maximize) or 1st quartile (minimize). - -Weights to be added may be needed. - -In case of HCS (high content screening) columns could be ten or hundreds, i.e. need a different selection tool. - -## Ensemble / Uniprot query -This app might be useful to query ENSEMBLE or UNIPROT basic information on ENSG / HGNC names of protein target. It collects some information (to be enlarged) and allows download. +This repository constains the overall suite of resources and tools built by the Fraunhofer ITMP data science team. diff --git a/images/Antimicrobial.webp b/images/antimicrobial.webp similarity index 100% rename from images/Antimicrobial.webp rename to images/antimicrobial.webp diff --git a/images/kg_1.PNG b/images/kg_1.png similarity index 100% rename from images/kg_1.PNG rename to images/kg_1.png diff --git a/images/kg_2.PNG b/images/kg_2.png similarity index 100% rename from images/kg_2.PNG rename to images/kg_2.png