From 762a7339f8a3df29af2ce68d582e89576ead084e Mon Sep 17 00:00:00 2001 From: Sam Minot Date: Mon, 5 Feb 2018 12:49:11 -0800 Subject: [PATCH] Link Samtools to MIDAS directory --- Dockerfile | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/Dockerfile b/Dockerfile index ffc4fd7..4a9fe11 100644 --- a/Dockerfile +++ b/Dockerfile @@ -39,7 +39,8 @@ RUN cd /usr/midas && \ rm /usr/local/bin/samtools && \ rm /usr/midas/MIDAS-1.3.2/bin/Linux/samtools && \ ln -s /usr/midas/samtools-1.4/samtools /usr/local/bin/ && \ - rm /usr/midas/samtools-1.4.tar.bz2 + rm /usr/midas/samtools-1.4.tar.bz2 && \ + ln -s /usr/midas/samtools-1.4/samtools /usr/midas/MIDAS-1.3.2/bin/Linux/ # Install the SRA toolkit RUN cd /usr/local/bin && \