diff --git a/align_pangenome.nf b/align_pangenome.nf index ce5a069..df36232 100644 --- a/align_pangenome.nf +++ b/align_pangenome.nf @@ -54,6 +54,7 @@ workflow { --gene_bins Grouping of genes into bins (e.g. gene_bins.csv) --group_profile Gene content of genome groups (e.g. group_profile.csv) + --genome_groups Grouping of genomes by gene content (e.g. genome_groups.csv) --output Folder where output files will be written --metadata Optional: Metadata table used to compare samples (CSV)