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Create tests for conversion to GFF3 #481

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garrettjstevens opened this issue Nov 21, 2024 · 0 comments
Open

Create tests for conversion to GFF3 #481

garrettjstevens opened this issue Nov 21, 2024 · 0 comments
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@dariober

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@garrettjstevens
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  • Move makeGFF3Feature from packages/apollo-shared/src/util.ts to a new file called packages/apollo-shared/src/GFF3/annotationFeatureToGFF3.ts and rename the function to annotationFeatureToGFF3.
  • Add a test file for annotationFeatureToGFF3. This should be based on the test file for gff3ToAnnotationFeature
  • Add some reasonable test cases

These tests shouldn't pass right now because of #427 and potentially other bugs, but I'd like to have the test cases ready so we can do test-driven development to fix the GFF3 export.
dariober added a commit that referenced this issue Nov 26, 2024
@dariober
Start adding test and possibly some fixes for #481
f00faeb 
Conversion to GFF3Feature includes source and score and sets ID and
Parent attributes. However, export to GFF from UI fails.
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@dariober @garrettjstevens