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"^0.17.2", allow-prereleases = true} +numpydoc = {version = "^1.6.0", allow-prereleases = true} +sphinx-togglebutton = {version = "^0.3.2", allow-prereleases = true} +sphinx-copybutton = {version = "^0.5.2", allow-prereleases = true} +sphinx-click = {version = "^5.0.1", allow-prereleases = true} +sphinxcontrib-mermaid = {version = "^0.9.2", allow-prereleases = true} [tool.poetry.scripts] # Main functions diff --git a/src/miv_simulator/geometry/alphavol.py b/src/miv_simulator/geometry/alphavol.py index 43400a5..dee2ef7 100644 --- a/src/miv_simulator/geometry/alphavol.py +++ b/src/miv_simulator/geometry/alphavol.py @@ -5,7 +5,8 @@ import networkx as nx import numpy as np -from numpy.core.umath_tests import inner1d + +# from numpy.core.umath_tests import inner1d from scipy.linalg import null_space from scipy.spatial import Delaunay @@ -100,7 +101,9 @@ def volumes(simplices, points): ## 3D Volume D = np.subtract(points[simplices[:, 3], :], A) BxC = np.cross(B, C, axis=1) - vol = inner1d(BxC, D) + vol = np.einsum( + "...i, ...i", BxC, D, optimize="optimal" + ) # inner1d(BxC, D) vol = np.abs(vol) / 6.0 else: ## 2D Area