Beignet is a work-in-progress. Contributions and feedback are encouraged!

Beignet

A standard library for biological research.

Installation

pip install beignet

Requires Python 3.10 or later and PyTorch 2.2.0 or later.

Layout

beignet: PyTorch operators
- beignet.datasets: PyTorch datasets
- beignet.func: composable PyTorch function transforms
- beignet.lightning: Lightning modules
  - beignet.lightning.datamodules: Lightning datamodules
- beignet.metrics: TorchMetrics metrics
  - beignet.metrics.functional: functional TorchMetrics metrics
- beignet.nn: PyTorch modules
  - beignet.nn.functional:
- beignet.optim: PyTorch optimizers
- beignet.samplers: PyTorch samplers
- beignet.transforms:
  - beignet.transforms.functional: