fix(cron): Run harvester cron job in background (run and clean up log… #71
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…ging) - Create entrypoint script to export environment variables to /etc/profile.d/custom_env.sh - Update crontab to source environment variables from custom_env.sh - Start cron daemon in background and tail cron log to keep container running - Ensure CKAN cron jobs have necessary environment context Closes #67
1 task
kburger
reviewed
Jun 10, 2024
ckan/Dockerfile.dev
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| @@ -47,4 +59,4 @@ RUN for d in $APP_DIR/patches/*; do \ | |||
| fi ; \ | |||
| done | |||
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| ENV CKAN__PLUGINS="envvars image_view text_view recline_view scheming_datasets scheming_organizations gdi_userportal dcat harvest ckan_harvester dcat_rdf_harvester dcat_json_harvester dcat_json_interface oidc_pkce fairdatapointharvester activity" | |||
| ENV CKAN__PLUGINS="envvars image_view text_view recline_view scheming_datasets scheming_organizations gdi_userportal dcat harvest ckan_harvester dcat_rdf_harvester dcat_json_harvester dcat_json_interface oidc_pkce fairdatapointharvester activity" | |||
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Is this missing a newline at the end of the file?
ckan/config/ckan_harvesting.conf
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| stderr_logfile=/var/log/cron.log | ||
| autostart=true | ||
| autorestart=true | ||
| startsecs=10 |
| BASH_ENV=/etc/profile.d/custom_env.sh | ||
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| # Every 15 minutes, run the harvester and clean the harvest log every day at 5am | ||
| */15 * * * * /usr/bin/ckan -c /srv/app/ckan.ini harvester run |
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Do/can this be configurable through an environment flag?
| #!/bin/sh | ||
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| # Dump environment variables to a file that will be sourced by cron | ||
| printenv | sed 's/^\(.*\)$/export \1/g' > /etc/profile.d/custom_env.sh |
Co-authored-by: kburger <[email protected]>
…ub.com/GenomicDataInfrastructure/gdi-userportal-ckan-docker into 67-gdi-ckan-harvesters-are-not-running
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Closes #67