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I wrote pick_measure() assuming that columns in the cell segmentation data are named like
Entire Cell Opal 520 Mean
but I think that it's possible for these names to change based on settings in inForm because the phenoptr documentation shows
Entire Cell PDL1 (Opal 520) Mean
as a valid column name.
pick_measure() should be more like a tidyselect helper. I think I can use quotation inside gather_intensity() so that pick_measure() can get access to column names in the csd and from there I can use basic regex to pick the right name.
The text was updated successfully, but these errors were encountered:
I wrote
pick_measure()
assuming that columns in the cell segmentation data are named likebut I think that it's possible for these names to change based on settings in inForm because the phenoptr documentation shows
as a valid column name.
pick_measure()
should be more like atidyselect
helper. I think I can use quotation insidegather_intensity()
so thatpick_measure()
can get access to column names in thecsd
and from there I can use basic regex to pick the right name.The text was updated successfully, but these errors were encountered: