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…kflow into develop
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GwenChen-NOAA committed Jul 2, 2024
2 parents fd68443 + ee15903 commit e271417
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10 changes: 10 additions & 0 deletions env/HERCULES.env
Original file line number Diff line number Diff line change
Expand Up @@ -132,6 +132,16 @@ case ${step} in
[[ ${NTHREADS_OCNANAL} -gt ${nth_max} ]] && export NTHREADS_OCNANAL=${nth_max}
export APRUN_OCNANAL="${launcher} -n ${npe_ocnanalrun} --cpus-per-task=${NTHREADS_OCNANAL}"
;;
"ocnanalecen")

export APRUNCFP="${launcher} -n \$ncmd ${mpmd_opt}"

nth_max=$((npe_node_max / npe_node_ocnanalecen))

export NTHREADS_OCNANALECEN=${nth_ocnanalecen:-${nth_max}}
[[ ${NTHREADS_OCNANALECEN} -gt ${nth_max} ]] && export NTHREADS_OCNANALECEN=${nth_max}
export APRUN_OCNANALECEN="${launcher} -n ${npe_ocnanalecen} --cpus-per-task=${NTHREADS_OCNANALECEN}"
;;
"ocnanalchkpt")

export APRUNCFP="${launcher} -n \$ncmd ${mpmd_opt}"
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5 changes: 0 additions & 5 deletions jobs/rocoto/aeroanlfinal.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,11 +11,6 @@ status=$?
export job="aeroanlfinal"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH
###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_FINALIZE"
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6 changes: 0 additions & 6 deletions jobs/rocoto/aeroanlinit.sh
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Expand Up @@ -11,12 +11,6 @@ status=$?
export job="aeroanlinit"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_INITIALIZE"
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6 changes: 0 additions & 6 deletions jobs/rocoto/aeroanlrun.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="aeroanlrun"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_RUN"
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5 changes: 0 additions & 5 deletions jobs/rocoto/atmanlfinal.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,11 +11,6 @@ status=$?
export job="atmanlfinal"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH
###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_FINALIZE"
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6 changes: 0 additions & 6 deletions jobs/rocoto/atmanlfv3inc.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="atmanlfv3inc"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_FV3_INCREMENT"
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6 changes: 0 additions & 6 deletions jobs/rocoto/atmanlinit.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="atmanlinit"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE"
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6 changes: 0 additions & 6 deletions jobs/rocoto/atmanlvar.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="atmanlvar"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_VARIATIONAL"
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5 changes: 0 additions & 5 deletions jobs/rocoto/atmensanlfinal.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,11 +11,6 @@ status=$?
export job="atmensanlfinal"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH
###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_FINALIZE"
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6 changes: 0 additions & 6 deletions jobs/rocoto/atmensanlfv3inc.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="atmensanlfv3inc"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_FV3_INCREMENT"
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6 changes: 0 additions & 6 deletions jobs/rocoto/atmensanlinit.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="atmensanlinit"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_INITIALIZE"
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6 changes: 0 additions & 6 deletions jobs/rocoto/atmensanlletkf.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="atmensanlletkf"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_LETKF"
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6 changes: 0 additions & 6 deletions jobs/rocoto/oceanice_products.sh
Original file line number Diff line number Diff line change
Expand Up @@ -12,12 +12,6 @@ source "${HOMEgfs}/ush/preamble.sh"
status=$?
if (( status != 0 )); then exit "${status}"; fi

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

export job="oceanice_products"
export jobid="${job}.$$"

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5 changes: 2 additions & 3 deletions jobs/rocoto/prepatmiodaobs.sh
Original file line number Diff line number Diff line change
Expand Up @@ -12,11 +12,10 @@ export job="prepatmobs"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow and ioda utilities
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
# setup python path for ioda utilities
# shellcheck disable=SC2311
pyiodaPATH="${HOMEgfs}/sorc/gdas.cd/build/lib/python$(detect_py_ver)/"
PYTHONPATH="${pyiodaPATH}:${wxflowPATH}:${PYTHONPATH}"
PYTHONPATH="${pyiodaPATH}:${PYTHONPATH}"
export PYTHONPATH

###############################################################
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6 changes: 0 additions & 6 deletions jobs/rocoto/prepobsaero.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="prepobsaero"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_PREP_OBS_AERO"
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5 changes: 2 additions & 3 deletions jobs/rocoto/prepsnowobs.sh
Original file line number Diff line number Diff line change
Expand Up @@ -12,12 +12,11 @@ export job="prepsnowobs"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
# setup python path for ioda utilities
# shellcheck disable=SC2311
pyiodaPATH="${HOMEgfs}/sorc/gdas.cd/build/lib/python$(detect_py_ver)/"
gdasappPATH="${HOMEgfs}/sorc/gdas.cd/sorc/iodaconv/src:${pyiodaPATH}"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}:${gdasappPATH}"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}:${gdasappPATH}"
export PYTHONPATH

###############################################################
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6 changes: 0 additions & 6 deletions jobs/rocoto/snowanl.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,6 @@ status=$?
export job="snowanl"
export jobid="${job}.$$"

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

###############################################################
# Execute the JJOB
"${HOMEgfs}/jobs/JGLOBAL_SNOW_ANALYSIS"
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12 changes: 6 additions & 6 deletions jobs/rocoto/upp.sh
Original file line number Diff line number Diff line change
Expand Up @@ -29,18 +29,18 @@ if [[ "${MACHINE_ID}" = "wcoss2" ]]; then
module load python/3.8.6
module load crtm/2.4.0 # TODO: This is only needed when UPP_RUN=goes. Is there a better way to handle this?
set_trace

# Add wxflow to PYTHONPATH
wxflowPATH="${HOMEgfs}/ush/python"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${HOMEgfs}/ush:${wxflowPATH}"
export PYTHONPATH

else
. "${HOMEgfs}/ush/load_fv3gfs_modules.sh"
status=$?
if (( status != 0 )); then exit "${status}"; fi
fi

###############################################################
# setup python path for workflow utilities and tasks
wxflowPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/wxflow/src"
PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${wxflowPATH}"
export PYTHONPATH

export job="upp"
export jobid="${job}.$$"

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7 changes: 5 additions & 2 deletions parm/config/gfs/config.atmanl
Original file line number Diff line number Diff line change
Expand Up @@ -15,14 +15,17 @@ export INTERP_METHOD='barycentric'
if [[ ${DOHYBVAR} = "YES" ]]; then
# shellcheck disable=SC2153
export CASE_ANL=${CASE_ENS}
export BERROR_YAML="background_error_hybrid_${STATICB_TYPE}_${LOCALIZATION_TYPE}"
export BERROR_YAML="atmosphere_background_error_hybrid_${STATICB_TYPE}_${LOCALIZATION_TYPE}"
else
export CASE_ANL=${CASE}
export BERROR_YAML="background_error_static_${STATICB_TYPE}"
export BERROR_YAML="atmosphere_background_error_static_${STATICB_TYPE}"
fi

export CRTM_FIX_YAML="${PARMgfs}/gdas/atm_crtm_coeff.yaml.j2"
export JEDI_FIX_YAML="${PARMgfs}/gdas/atm_jedi_fix.yaml.j2"
export VAR_BKG_STAGING_YAML="${PARMgfs}/gdas/staging/atm_var_bkg.yaml.j2"
export BERROR_STAGING_YAML="${PARMgfs}/gdas/staging/atm_berror_${STATICB_TYPE}.yaml.j2"
export FV3ENS_STAGING_YAML="${PARMgfs}/gdas/staging/atm_var_fv3ens.yaml.j2"

export layout_x_atmanl=@LAYOUT_X_ATMANL@
export layout_y_atmanl=@LAYOUT_Y_ATMANL@
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1 change: 1 addition & 0 deletions parm/config/gfs/config.atmensanl
Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,7 @@ export INTERP_METHOD='barycentric'

export CRTM_FIX_YAML="${PARMgfs}/gdas/atm_crtm_coeff.yaml.j2"
export JEDI_FIX_YAML="${PARMgfs}/gdas/atm_jedi_fix.yaml.j2"
export LGETKF_BKG_STAGING_YAML="${PARMgfs}/gdas/staging/atm_lgetkf_bkg.yaml.j2"

export layout_x_atmensanl=@LAYOUT_X_ATMENSANL@
export layout_y_atmensanl=@LAYOUT_Y_ATMENSANL@
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8 changes: 8 additions & 0 deletions parm/gdas/staging/atm_berror_gsibec.yaml.j2
Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
{% set fname_list = ['gfs_gsi_global.nml', 'gsi-coeffs-gfs-global.nc4'] %}

mkdir:
- '{{ DATA }}/berror'
copy:
{% for fname in fname_list %}
- ['{{ HOMEgfs }}/fix/gdas/gsibec/{{ CASE_ANL }}/{{ fname }}', '{{ DATA }}/berror']
{% endfor %}
32 changes: 32 additions & 0 deletions parm/gdas/staging/atm_lgetkf_bkg.yaml.j2
Original file line number Diff line number Diff line change
@@ -0,0 +1,32 @@
{% set ftype_list = ['fv_core.res', 'fv_srf_wnd.res', 'fv_tracer.res', 'phy_data', 'sfc_data'] %}
{% set time_list = [current_cycle] %}

mkdir:
{% for imem in range(1,NMEM_ENS+1) %}
{% set memchar = 'mem%03d' | format(imem) %}
{% set tmpl_dict = ({ '${ROTDIR}': ROTDIR,
'${RUN}': RUN,
'${YMD}': current_cycle | to_YMD,
'${HH}': current_cycle | strftime('%H'),
'${MEMDIR}': memchar }) %}
- '{{ DATA }}/bkg/{{ memchar }}'
- '{{ DATA }}/anl/{{ memchar }}'
- '{{ COM_ATMOS_ANALYSIS_TMPL | replace_tmpl(tmpl_dict) }}'
{% endfor %}
copy:
{% for time in time_list %}
{% for imem in range(1,NMEM_ENS+1) %}
{% set memchar = 'mem%03d' | format(imem) %}
{% set tmpl_dict = ({ '${ROTDIR}': ROTDIR,
'${RUN}': 'enkfgdas',
'${YMD}': previous_cycle | to_YMD,
'${HH}': previous_cycle | strftime('%H'),
'${MEMDIR}': memchar }) %}
- ['{{ COM_ATMOS_RESTART_TMPL | replace_tmpl(tmpl_dict) }}/{{ time | to_fv3time }}.coupler.res', '{{ DATA }}/bkg/{{ memchar }}/']
{% for ftype in ftype_list %}
{% for itile in range(1,7) %}
- ['{{ COM_ATMOS_RESTART_TMPL | replace_tmpl(tmpl_dict) }}/{{ time | to_fv3time }}.{{ ftype }}.tile{{ itile }}.nc', '{{ DATA }}/bkg/{{ memchar }}/']
{% endfor %}
{% endfor %}
{% endfor %}
{% endfor %}
14 changes: 14 additions & 0 deletions parm/gdas/staging/atm_var_bkg.yaml.j2
Original file line number Diff line number Diff line change
@@ -0,0 +1,14 @@
{% set ftype_list = ['fv_core.res', 'fv_srf_wnd.res', 'fv_tracer.res', 'phy_data', 'sfc_data'] %}
{% set time_list = [current_cycle] %}

mkdir:
- '{{ DATA }}/bkg'
copy:
{% for time in time_list %}
- ['{{ COM_ATMOS_RESTART_PREV }}/{{ time | to_fv3time }}.coupler.res', '{{ DATA }}/bkg/']
{% for ftype in ftype_list %}
{% for itile in range(1,ntiles+1) %}
- ['{{ COM_ATMOS_RESTART_PREV }}/{{ time | to_fv3time }}.{{ ftype }}.tile{{ itile }}.nc', '{{ DATA }}/bkg/']
{% endfor %}
{% endfor %}
{% endfor %}
24 changes: 24 additions & 0 deletions parm/gdas/staging/atm_var_fv3ens.yaml.j2
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
{% set ftype_list = ['fv_core.res', 'fv_srf_wnd.res', 'fv_tracer.res', 'phy_data', 'sfc_data'] %}
{% set time_list = [current_cycle] %}

mkdir:
{% for imem in range(1,NMEM_ENS+1) %}
- '{{ DATA }}/ens/{{ 'mem%03d' | format(imem) }}'
{% endfor %}
copy:
{% for time in time_list %}
{% for imem in range(1,NMEM_ENS+1) %}
{% set memchar = 'mem%03d' | format(imem) %}
{% set tmpl_dict = ({ '${ROTDIR}': ROTDIR,
'${RUN}': 'enkfgdas',
'${YMD}': previous_cycle | to_YMD,
'${HH}': previous_cycle | strftime('%H'),
'${MEMDIR}': memchar }) %}
- ['{{ COM_ATMOS_RESTART_TMPL | replace_tmpl(tmpl_dict) }}/{{ time | to_fv3time }}.coupler.res', '{{ DATA }}/ens/{{ memchar }}/']
{% for ftype in ftype_list %}
{% for itile in range(1,ntiles+1) %}
- ['{{ COM_ATMOS_RESTART_TMPL | replace_tmpl(tmpl_dict) }}/{{ time | to_fv3time }}.{{ ftype }}.tile{{ itile }}.nc', '{{ DATA }}/ens/{{ memchar }}/']
{% endfor %}
{% endfor %}
{% endfor %}
{% endfor %}
6 changes: 3 additions & 3 deletions scripts/exglobal_cleanup.sh
Original file line number Diff line number Diff line change
Expand Up @@ -14,13 +14,13 @@ rm -rf "${DATAROOT}/${RUN}efcs"*"${PDY:-}${cyc}"

# Search and delete files/directories from DATAROOT/ older than ${purge_every_days} days
# purge_every_days should be a positive integer
purge_every_days=3
#purge_every_days=3

# Find and delete files older than ${purge_every_days} days
find "${DATAROOT}/"* -type f -mtime "+${purge_every_days}" -exec rm -f {} \;
#find "${DATAROOT}/"* -type f -mtime "+${purge_every_days}" -exec rm -f {} \;

# Find and delete directories older than ${purge_every_days} days
find "${DATAROOT}/"* -type d -mtime "+${purge_every_days}" -exec rm -rf {} \;
#find "${DATAROOT}/"* -type d -mtime "+${purge_every_days}" -exec rm -rf {} \;

echo "Cleanup ${DATAROOT} completed!"
###############################################################
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2 changes: 1 addition & 1 deletion scripts/exglobal_prep_snow_obs.py
Original file line number Diff line number Diff line change
Expand Up @@ -21,5 +21,5 @@
# Instantiate the snow prepare task
SnowAnl = SnowAnalysis(config)
SnowAnl.prepare_GTS()
if f"{ SnowAnl.runtime_config.cyc }" == '18':
if f"{ SnowAnl.task_config.cyc }" == '18':
SnowAnl.prepare_IMS()
2 changes: 1 addition & 1 deletion sorc/gdas.cd
Submodule gdas.cd updated 51 files
+19 −0 README.md
+1 −1 build.sh
+25 −4 ci/driver.sh
+27 −2 ci/gw_driver.sh
+2 −2 ci/hera.sh
+0 −3 modulefiles/GDAS/gaea.intel.lua
+0 −3 modulefiles/GDAS/hera.intel.lua
+0 −3 modulefiles/GDAS/noaacloud.intel.lua
+10 −9 modulefiles/GDAS/orion.intel.lua
+5 −2 parm/aero/berror/aero_diffusionparm.yaml.j2
+33 −0 parm/aero/berror/staticb_diffusion.yaml.j2
+49 −57 parm/atm/jcb-base.yaml.j2
+1 −1 parm/atm/jcb-prototype_lgetkf.yaml.j2
+0 −356 parm/atm/obs/config/satwind_modis_aqua.yaml.j2
+0 −368 parm/atm/obs/config/satwind_modis_terra.yaml.j2
+0 −289 parm/atm/obs/config/satwind_viirs_n20.yaml.j2
+0 −289 parm/atm/obs/config/satwind_viirs_npp.yaml.j2
+1 −1 parm/jcb-algorithms
+1 −1 parm/jcb-gdas
+5 −0 parm/soca/marine-jcb-3dfgat.yaml.j2
+72 −0 parm/soca/marine-jcb-base.yaml
+67 −1 scripts/exgdas_global_marine_analysis_prep.py
+13 −3 scripts/exgdas_global_marine_analysis_vrfy.py
+1 −1 sorc/jcb
+9 −0 test/aero/genyaml_3dvar.sh
+1 −1 test/aero/global-workflow/jjob_var_final.sh
+1 −1 test/aero/global-workflow/jjob_var_init.sh
+1 −1 test/aero/global-workflow/jjob_var_run.sh
+2 −2 test/atm/global-workflow/jcb-prototype_3dvar.yaml.j2
+2 −2 test/atm/global-workflow/jcb-prototype_lgetkf.yaml.j2
+1 −1 test/atm/global-workflow/jjob_ens_final.sh
+1 −1 test/atm/global-workflow/jjob_ens_inc.sh
+1 −1 test/atm/global-workflow/jjob_ens_init.sh
+1 −1 test/atm/global-workflow/jjob_ens_run.sh
+1 −1 test/atm/global-workflow/jjob_var_final.sh
+1 −1 test/atm/global-workflow/jjob_var_inc.sh
+1 −1 test/atm/global-workflow/jjob_var_init.sh
+1 −1 test/atm/global-workflow/jjob_var_run.sh
+6 −17 test/soca/gw/CMakeLists.txt
+9 −0 test/soca/socaincr2mom6.sh
+3 −3 ush/eva/marine_gdas_plots.yaml
+1 −4 ush/examples/run_scripts/soca1deg.yaml
+0 −45 ush/soca/examples/run_jjobs_container.yaml
+0 −50 ush/soca/examples/run_jjobs_hera.yaml
+0 −50 ush/soca/examples/run_jjobs_hera_025.yaml
+56 −56 ush/soca/marine_recenter.py
+29 −29 ush/soca/prep_ocean_obs.py
+4 −4 ush/soca/prep_ocean_obs_utils.py
+2 −3 ush/soca/run_jjobs.py
+94 −33 ush/soca/soca_vrfy.py
+3 −3 utils/soca/gdas_soca_diagb.h
2 changes: 1 addition & 1 deletion sorc/wxflow
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